Protein–RNA interactions for Protein: Q80XJ2

Rnf168, E3 ubiquitin-protein ligase RNF168, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf168Q80XJ2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Gm24231-201ENSMUST00000104315 133 ntBASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Gm12176-201ENSMUST00000121420 875 ntBASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.09□□□□□ -0.31
Rnf168Q80XJ2 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.08□□□□□ -0.31
Rnf168Q80XJ2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Gm14644-201ENSMUST00000116671 647 ntBASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Gm11331-201ENSMUST00000119764 288 ntBASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Gm17040-202ENSMUST00000170597 889 ntBASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Pck2-205ENSMUST00000226352 2784 ntBASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rnf168Q80XJ2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf168Q80XJ2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Rnf168Q80XJ2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf168Q80XJ2 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Rnf168Q80XJ2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf168Q80XJ2 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf168Q80XJ2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf168Q80XJ2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf168Q80XJ2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rnf168Q80XJ2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf168Q80XJ2 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf168Q80XJ2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.07□□□□□ -0.32
Rnf168Q80XJ2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rnf168Q80XJ2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf168Q80XJ2 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf168Q80XJ2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf168Q80XJ2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf168Q80XJ2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.07□□□□□ -0.32
Rnf168Q80XJ2 Gm12266-201ENSMUST00000120311 962 ntBASIC13.07□□□□□ -0.32
Rnf168Q80XJ2 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rnf168Q80XJ2 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms