Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim36Q80WG7 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.82□□□□□ -0.52
Trim36Q80WG7 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Gm14704-201ENSMUST00000120300 874 ntBASIC11.82□□□□□ -0.52
Trim36Q80WG7 Gm11793-201ENSMUST00000120433 981 ntBASIC11.82□□□□□ -0.52
Trim36Q80WG7 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Trim36Q80WG7 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim36Q80WG7 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Gm22121-201ENSMUST00000175148 54 ntBASIC11.82□□□□□ -0.52
Trim36Q80WG7 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Trim36Q80WG7 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Gm37042-201ENSMUST00000193816 581 ntBASIC11.82□□□□□ -0.52
Trim36Q80WG7 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim36Q80WG7 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.82□□□□□ -0.52
Trim36Q80WG7 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.82□□□□□ -0.52
Trim36Q80WG7 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.82□□□□□ -0.52
Trim36Q80WG7 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim36Q80WG7 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim36Q80WG7 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Gm11591-201ENSMUST00000120063 702 ntBASIC11.81□□□□□ -0.52
Trim36Q80WG7 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.81□□□□□ -0.52
Trim36Q80WG7 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.81□□□□□ -0.52
Trim36Q80WG7 Gm42627-201ENSMUST00000197347 224 ntBASIC11.81□□□□□ -0.52
Trim36Q80WG7 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.81□□□□□ -0.52
Trim36Q80WG7 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Gm9257-201ENSMUST00000221254 232 ntBASIC11.81□□□□□ -0.52
Trim36Q80WG7 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.81□□□□□ -0.52
Trim36Q80WG7 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.81□□□□□ -0.52
Trim36Q80WG7 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.81□□□□□ -0.52
Trim36Q80WG7 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.81□□□□□ -0.52
Trim36Q80WG7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim36Q80WG7 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim36Q80WG7 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim36Q80WG7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trim36Q80WG7 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim36Q80WG7 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim36Q80WG7 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim36Q80WG7 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.8□□□□□ -0.52
Trim36Q80WG7 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim36Q80WG7 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Trim36Q80WG7 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim36Q80WG7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim36Q80WG7 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim36Q80WG7 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Trim36Q80WG7 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.8□□□□□ -0.52
Trim36Q80WG7 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Trim36Q80WG7 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim36Q80WG7 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.8□□□□□ -0.52
Trim36Q80WG7 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim36Q80WG7 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.8□□□□□ -0.52
Trim36Q80WG7 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.8□□□□□ -0.52
Trim36Q80WG7 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.8□□□□□ -0.52
Trim36Q80WG7 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim36Q80WG7 Gm43822-201ENSMUST00000200285 476 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms