Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Gm25668-201ENSMUST00000157700 129 ntBASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smarcc2Q6PDG5 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Gm15547-201ENSMUST00000122152 333 ntBASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcc2Q6PDG5 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Smarcc2Q6PDG5 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc2Q6PDG5 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc2Q6PDG5 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc2Q6PDG5 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms