Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rc3h1Q4VGL6 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Gm23912-201ENSMUST00000104687 87 ntBASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Gm11509-201ENSMUST00000117358 325 ntBASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Gm11450-201ENSMUST00000121144 333 ntBASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Gm18038-201ENSMUST00000197900 485 ntBASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rc3h1Q4VGL6 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Gm11331-201ENSMUST00000119764 288 ntBASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Gm12176-201ENSMUST00000121420 875 ntBASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Gm14363-201ENSMUST00000122304 409 ntBASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Gm7430-201ENSMUST00000193824 1144 ntBASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Gm44100-201ENSMUST00000204329 436 ntBASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Pck2-205ENSMUST00000226352 2784 ntBASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rc3h1Q4VGL6 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Gm23596-201ENSMUST00000104304 132 ntBASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.1□□□□□ -0.15
Rc3h1Q4VGL6 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms