Protein–RNA interactions for Protein: Q3UU56

Gm29609, Predicted gene 29609, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29609Q3UU56 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Gm14109-201ENSMUST00000118814 309 ntBASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Gm28324-201ENSMUST00000187913 264 ntBASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Gm38092-201ENSMUST00000195600 653 ntBASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Gm9555-201ENSMUST00000200908 583 ntBASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Gm29609Q3UU56 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Gm11531-201ENSMUST00000117614 555 ntBASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Gm14760-201ENSMUST00000121831 999 ntBASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.87□□□□□ -0.35
Gm29609Q3UU56 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Gm42779-201ENSMUST00000198807 406 ntBASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Gm18730-201ENSMUST00000218038 343 ntBASIC12.87□□□□□ -0.35
Gm29609Q3UU56 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Gm29609Q3UU56 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm29609Q3UU56 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm29609Q3UU56 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm29609Q3UU56 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Gm29609Q3UU56 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm29609Q3UU56 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Gm29609Q3UU56 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Gm29609Q3UU56 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm29609Q3UU56 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm29609Q3UU56 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm29609Q3UU56 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Gm29609Q3UU56 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Gm29609Q3UU56 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms