Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pfdn6Q03958 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pfdn6Q03958 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.29□□□□□ -0.44
Pfdn6Q03958 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pfdn6Q03958 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.29□□□□□ -0.44
Pfdn6Q03958 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.29□□□□□ -0.44
Pfdn6Q03958 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.29□□□□□ -0.44
Pfdn6Q03958 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.29□□□□□ -0.44
Pfdn6Q03958 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pfdn6Q03958 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.28□□□□□ -0.44
Pfdn6Q03958 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.28□□□□□ -0.44
Pfdn6Q03958 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.28□□□□□ -0.44
Pfdn6Q03958 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Gm23119-201ENSMUST00000158610 140 ntBASIC12.28□□□□□ -0.44
Pfdn6Q03958 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Mospd4-201ENSMUST00000180618 576 ntBASIC12.28□□□□□ -0.44
Pfdn6Q03958 Gm4034-201ENSMUST00000187674 480 ntBASIC12.28□□□□□ -0.44
Pfdn6Q03958 Gm42599-201ENSMUST00000201308 469 ntBASIC12.28□□□□□ -0.44
Pfdn6Q03958 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.28□□□□□ -0.44
Pfdn6Q03958 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.28□□□□□ -0.44
Pfdn6Q03958 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.28□□□□□ -0.44
Pfdn6Q03958 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.28□□□□□ -0.44
Pfdn6Q03958 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.28□□□□□ -0.44
Pfdn6Q03958 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pfdn6Q03958 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms