Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.3□□□□□ -0.6
Cacna1aP97445 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cacna1aP97445 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cacna1aP97445 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cacna1aP97445 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cacna1aP97445 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cacna1aP97445 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cacna1aP97445 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cacna1aP97445 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Cacna1aP97445 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cacna1aP97445 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cacna1aP97445 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cacna1aP97445 Gm14219-201ENSMUST00000120414 288 ntBASIC11.29□□□□□ -0.6
Cacna1aP97445 Gm6485-201ENSMUST00000160676 439 ntBASIC11.29□□□□□ -0.6
Cacna1aP97445 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cacna1aP97445 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cacna1aP97445 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cacna1aP97445 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cacna1aP97445 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cacna1aP97445 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cacna1aP97445 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.29□□□□□ -0.6
Cacna1aP97445 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Cacna1aP97445 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cacna1aP97445 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cacna1aP97445 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cacna1aP97445 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cacna1aP97445 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cacna1aP97445 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.28□□□□□ -0.6
Cacna1aP97445 Gm22711-201ENSMUST00000116890 133 ntBASIC11.28□□□□□ -0.6
Cacna1aP97445 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.28□□□□□ -0.6
Cacna1aP97445 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.28□□□□□ -0.6
Cacna1aP97445 Gm18059-201ENSMUST00000208073 580 ntBASIC11.28□□□□□ -0.6
Cacna1aP97445 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.28□□□□□ -0.6
Cacna1aP97445 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.28□□□□□ -0.6
Cacna1aP97445 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cacna1aP97445 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cacna1aP97445 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.28□□□□□ -0.6
Cacna1aP97445 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.28□□□□□ -0.6
Cacna1aP97445 Mir874-201ENSMUST00000104769 76 ntBASIC11.28□□□□□ -0.6
Cacna1aP97445 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.28□□□□□ -0.6
Cacna1aP97445 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.28□□□□□ -0.6
Cacna1aP97445 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.28□□□□□ -0.6
Cacna1aP97445 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.28□□□□□ -0.6
Cacna1aP97445 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cacna1aP97445 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.28□□□□□ -0.6
Cacna1aP97445 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.28□□□□□ -0.6
Cacna1aP97445 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cacna1aP97445 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cacna1aP97445 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cacna1aP97445 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.28□□□□□ -0.6
Cacna1aP97445 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cacna1aP97445 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cacna1aP97445 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cacna1aP97445 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cacna1aP97445 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cacna1aP97445 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Cacna1aP97445 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cacna1aP97445 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Cacna1aP97445 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cacna1aP97445 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cacna1aP97445 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cacna1aP97445 Gm13022-201ENSMUST00000121181 285 ntBASIC11.27□□□□□ -0.6
Cacna1aP97445 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Cacna1aP97445 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cacna1aP97445 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.27□□□□□ -0.6
Cacna1aP97445 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cacna1aP97445 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.27□□□□□ -0.6
Cacna1aP97445 Gm43184-201ENSMUST00000197247 542 ntBASIC11.27□□□□□ -0.6
Cacna1aP97445 Gm43520-201ENSMUST00000197996 164 ntBASIC11.27□□□□□ -0.6
Cacna1aP97445 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.27□□□□□ -0.6
Cacna1aP97445 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.27□□□□□ -0.6
Cacna1aP97445 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cacna1aP97445 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.6
Cacna1aP97445 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cacna1aP97445 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cacna1aP97445 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cacna1aP97445 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms