Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tpm1P58771 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tpm1P58771 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tpm1P58771 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Tpm1P58771 Gm10156-201ENSMUST00000122364 462 ntBASIC13.61□□□□□ -0.23
Tpm1P58771 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tpm1P58771 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.61□□□□□ -0.23
Tpm1P58771 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.61□□□□□ -0.23
Tpm1P58771 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tpm1P58771 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tpm1P58771 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tpm1P58771 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tpm1P58771 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tpm1P58771 Gm24526-201ENSMUST00000082921 158 ntBASIC13.61□□□□□ -0.23
Tpm1P58771 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tpm1P58771 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tpm1P58771 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tpm1P58771 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tpm1P58771 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tpm1P58771 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tpm1P58771 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tpm1P58771 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tpm1P58771 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Tpm1P58771 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC13.61□□□□□ -0.23
Tpm1P58771 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tpm1P58771 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.61□□□□□ -0.23
Tpm1P58771 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tpm1P58771 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tpm1P58771 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tpm1P58771 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tpm1P58771 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tpm1P58771 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Tpm1P58771 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tpm1P58771 Gm36987-201ENSMUST00000194704 2979 ntBASIC13.6□□□□□ -0.23
Tpm1P58771 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tpm1P58771 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Tpm1P58771 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Tpm1P58771 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tpm1P58771 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tpm1P58771 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tpm1P58771 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.6□□□□□ -0.23
Tpm1P58771 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tpm1P58771 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.6□□□□□ -0.23
Tpm1P58771 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Tpm1P58771 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tpm1P58771 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tpm1P58771 Gm27701-201ENSMUST00000184498 110 ntBASIC13.6□□□□□ -0.23
Tpm1P58771 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.6□□□□□ -0.23
Tpm1P58771 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.6□□□□□ -0.23
Tpm1P58771 Gm38114-201ENSMUST00000191877 1232 ntBASIC13.6□□□□□ -0.23
Tpm1P58771 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tpm1P58771 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tpm1P58771 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tpm1P58771 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tpm1P58771 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tpm1P58771 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tpm1P58771 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tpm1P58771 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tpm1P58771 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tpm1P58771 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tpm1P58771 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.6□□□□□ -0.23
Tpm1P58771 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Tpm1P58771 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tpm1P58771 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tpm1P58771 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tpm1P58771 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tpm1P58771 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tpm1P58771 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tpm1P58771 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tpm1P58771 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tpm1P58771 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tpm1P58771 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tpm1P58771 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.59□□□□□ -0.23
Tpm1P58771 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tpm1P58771 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.59□□□□□ -0.23
Tpm1P58771 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.59□□□□□ -0.23
Tpm1P58771 Proscos-202ENSMUST00000178990 666 ntBASIC13.59□□□□□ -0.23
Tpm1P58771 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Tpm1P58771 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.59□□□□□ -0.23
Tpm1P58771 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tpm1P58771 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tpm1P58771 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.59□□□□□ -0.23
Tpm1P58771 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.59□□□□□ -0.23
Tpm1P58771 Gm8598-201ENSMUST00000221184 836 ntBASIC13.59□□□□□ -0.23
Tpm1P58771 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Tpm1P58771 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Tpm1P58771 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tpm1P58771 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tpm1P58771 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tpm1P58771 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tpm1P58771 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tpm1P58771 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tpm1P58771 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tpm1P58771 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tpm1P58771 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Tpm1P58771 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tpm1P58771 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tpm1P58771 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
Tpm1P58771 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Tpm1P58771 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms