Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Msh6P54276 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
Msh6P54276 Gm10731-201ENSMUST00000181171 448 ntBASIC15.39■□□□□ 0.05
Msh6P54276 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Msh6P54276 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh6P54276 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh6P54276 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh6P54276 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Msh6P54276 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh6P54276 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh6P54276 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh6P54276 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh6P54276 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
Msh6P54276 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh6P54276 Gm14132-201ENSMUST00000117188 1719 ntBASIC15.39■□□□□ 0.05
Msh6P54276 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh6P54276 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh6P54276 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Msh6P54276 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Msh6P54276 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Msh6P54276 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC15.38■□□□□ 0.05
Msh6P54276 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Msh6P54276 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Msh6P54276 Gm11956-201ENSMUST00000119525 512 ntBASIC15.38■□□□□ 0.05
Msh6P54276 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Msh6P54276 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
Msh6P54276 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC15.38■□□□□ 0.05
Msh6P54276 Rn7s6-201ENSMUST00000175005 291 ntBASIC15.38■□□□□ 0.05
Msh6P54276 Mir6998-201ENSMUST00000183343 64 ntBASIC15.38■□□□□ 0.05
Msh6P54276 Gm37299-201ENSMUST00000193951 826 ntBASIC15.38■□□□□ 0.05
Msh6P54276 Gm43520-201ENSMUST00000197996 164 ntBASIC15.38■□□□□ 0.05
Msh6P54276 Gm9797-202ENSMUST00000218003 294 ntBASIC15.38■□□□□ 0.05
Msh6P54276 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Msh6P54276 Gm10152-201ENSMUST00000193475 1344 ntBASIC15.38■□□□□ 0.05
Msh6P54276 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Msh6P54276 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Msh6P54276 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Msh6P54276 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Msh6P54276 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC15.38■□□□□ 0.05
Msh6P54276 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC15.38■□□□□ 0.05
Msh6P54276 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Msh6P54276 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Msh6P54276 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
Msh6P54276 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Msh6P54276 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Msh6P54276 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Msh6P54276 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Msh6P54276 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Msh6P54276 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Msh6P54276 Gm15352-201ENSMUST00000118696 270 ntBASIC15.37■□□□□ 0.05
Msh6P54276 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC15.37■□□□□ 0.05
Msh6P54276 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Msh6P54276 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC15.37■□□□□ 0.05
Msh6P54276 Gm25072-201ENSMUST00000175233 235 ntBASIC15.37■□□□□ 0.05
Msh6P54276 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Msh6P54276 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC15.37■□□□□ 0.05
Msh6P54276 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Msh6P54276 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Msh6P54276 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Msh6P54276 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Msh6P54276 Gm5053-201ENSMUST00000208361 1678 ntBASIC15.37■□□□□ 0.05
Msh6P54276 Gm7224-201ENSMUST00000121359 2066 ntBASIC15.37■□□□□ 0.05
Msh6P54276 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Msh6P54276 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Msh6P54276 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Msh6P54276 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Msh6P54276 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.37■□□□□ 0.05
Msh6P54276 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Msh6P54276 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Msh6P54276 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Msh6P54276 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Msh6P54276 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Msh6P54276 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Msh6P54276 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Msh6P54276 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Msh6P54276 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Msh6P54276 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Msh6P54276 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC15.37■□□□□ 0.05
Msh6P54276 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Msh6P54276 Gm16071-201ENSMUST00000119589 793 ntBASIC15.36■□□□□ 0.05
Msh6P54276 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Msh6P54276 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC15.36■□□□□ 0.05
Msh6P54276 Gm17826-201ENSMUST00000189720 798 ntBASIC15.36■□□□□ 0.05
Msh6P54276 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC15.36■□□□□ 0.05
Msh6P54276 Ighv1-60-201ENSMUST00000195816 405 ntBASIC15.36■□□□□ 0.05
Msh6P54276 Gm5705-201ENSMUST00000066241 711 ntBASIC15.36■□□□□ 0.05
Msh6P54276 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh6P54276 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh6P54276 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh6P54276 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh6P54276 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh6P54276 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh6P54276 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh6P54276 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Msh6P54276 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh6P54276 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Msh6P54276 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh6P54276 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Msh6P54276 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Msh6P54276 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms