Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
LmnaP48678 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.82□□□□□ -0.36
LmnaP48678 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LmnaP48678 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
LmnaP48678 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.81□□□□□ -0.36
LmnaP48678 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.81□□□□□ -0.36
LmnaP48678 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LmnaP48678 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.81□□□□□ -0.36
LmnaP48678 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
LmnaP48678 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.81□□□□□ -0.36
LmnaP48678 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
LmnaP48678 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LmnaP48678 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Gm16397-201ENSMUST00000122201 494 ntBASIC12.81□□□□□ -0.36
LmnaP48678 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.81□□□□□ -0.36
LmnaP48678 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.81□□□□□ -0.36
LmnaP48678 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
LmnaP48678 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Gm6407-201ENSMUST00000176468 549 ntBASIC12.81□□□□□ -0.36
LmnaP48678 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.81□□□□□ -0.36
LmnaP48678 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC12.81□□□□□ -0.36
LmnaP48678 Gm5950-201ENSMUST00000213337 772 ntBASIC12.81□□□□□ -0.36
LmnaP48678 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC12.81□□□□□ -0.36
LmnaP48678 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
LmnaP48678 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
LmnaP48678 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LmnaP48678 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.81□□□□□ -0.36
LmnaP48678 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
LmnaP48678 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.8□□□□□ -0.36
LmnaP48678 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LmnaP48678 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LmnaP48678 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LmnaP48678 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LmnaP48678 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LmnaP48678 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LmnaP48678 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LmnaP48678 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LmnaP48678 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LmnaP48678 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.8□□□□□ -0.36
LmnaP48678 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.8□□□□□ -0.36
LmnaP48678 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LmnaP48678 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LmnaP48678 Gm2546-201ENSMUST00000182630 991 ntBASIC12.8□□□□□ -0.36
LmnaP48678 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.8□□□□□ -0.36
LmnaP48678 Gm3096-201ENSMUST00000185770 364 ntBASIC12.8□□□□□ -0.36
LmnaP48678 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.8□□□□□ -0.36
LmnaP48678 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LmnaP48678 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LmnaP48678 Gm44126-201ENSMUST00000204831 514 ntBASIC12.8□□□□□ -0.36
LmnaP48678 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LmnaP48678 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.8□□□□□ -0.36
LmnaP48678 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LmnaP48678 Spcs1-203ENSMUST00000226374 592 ntBASIC12.8□□□□□ -0.36
LmnaP48678 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.8□□□□□ -0.36
LmnaP48678 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LmnaP48678 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LmnaP48678 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LmnaP48678 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LmnaP48678 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.8□□□□□ -0.36
LmnaP48678 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LmnaP48678 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LmnaP48678 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LmnaP48678 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LmnaP48678 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.8□□□□□ -0.36
LmnaP48678 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LmnaP48678 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LmnaP48678 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LmnaP48678 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LmnaP48678 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LmnaP48678 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LmnaP48678 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms