Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gli1P47806 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gli1P47806 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gli1P47806 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gli1P47806 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.95□□□□□ -0.5
Gli1P47806 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Gli1P47806 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gli1P47806 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gli1P47806 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gli1P47806 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gli1P47806 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gli1P47806 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gli1P47806 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gli1P47806 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.94□□□□□ -0.5
Gli1P47806 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Gli1P47806 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Gli1P47806 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Gli1P47806 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.94□□□□□ -0.5
Gli1P47806 Gm13786-201ENSMUST00000122371 333 ntBASIC11.94□□□□□ -0.5
Gli1P47806 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.94□□□□□ -0.5
Gli1P47806 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Gm17376-201ENSMUST00000166016 84 ntBASIC11.94□□□□□ -0.5
Gli1P47806 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Gm6621-201ENSMUST00000193251 772 ntBASIC11.94□□□□□ -0.5
Gli1P47806 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.94□□□□□ -0.5
Gli1P47806 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Gm6082-201ENSMUST00000215204 454 ntBASIC11.94□□□□□ -0.5
Gli1P47806 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.94□□□□□ -0.5
Gli1P47806 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Gli1P47806 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.94□□□□□ -0.5
Gli1P47806 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.94□□□□□ -0.5
Gli1P47806 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Gli1P47806 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Gli1P47806 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Gli1P47806 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.94□□□□□ -0.5
Gli1P47806 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gli1P47806 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Gli1P47806 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Gli1P47806 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Gli1P47806 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.93□□□□□ -0.5
Gli1P47806 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gli1P47806 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gli1P47806 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gli1P47806 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gli1P47806 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gli1P47806 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gli1P47806 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.93□□□□□ -0.5
Gli1P47806 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gli1P47806 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gli1P47806 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gli1P47806 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gli1P47806 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gli1P47806 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gli1P47806 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gli1P47806 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Gli1P47806 Gm24255-201ENSMUST00000104481 128 ntBASIC11.93□□□□□ -0.5
Gli1P47806 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.93□□□□□ -0.5
Gli1P47806 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.93□□□□□ -0.5
Gli1P47806 Gm6222-202ENSMUST00000182143 629 ntBASIC11.93□□□□□ -0.5
Gli1P47806 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.93□□□□□ -0.5
Gli1P47806 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.93□□□□□ -0.5
Gli1P47806 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gli1P47806 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.93□□□□□ -0.5
Gli1P47806 Gm8227-201ENSMUST00000223306 571 ntBASIC11.93□□□□□ -0.5
Gli1P47806 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.93□□□□□ -0.5
Gli1P47806 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Gli1P47806 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms