Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC15.76■□□□□ 0.11
Col18a1P39061 Gm8019-201ENSMUST00000119317 587 ntBASIC15.76■□□□□ 0.11
Col18a1P39061 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col18a1P39061 Gm25872-201ENSMUST00000177784 100 ntBASIC15.76■□□□□ 0.11
Col18a1P39061 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC15.76■□□□□ 0.11
Col18a1P39061 Gm29067-201ENSMUST00000190821 470 ntBASIC15.76■□□□□ 0.11
Col18a1P39061 Gm33707-201ENSMUST00000195135 569 ntBASIC15.76■□□□□ 0.11
Col18a1P39061 AC122035.1-201ENSMUST00000227576 1016 ntBASIC15.76■□□□□ 0.11
Col18a1P39061 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col18a1P39061 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col18a1P39061 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col18a1P39061 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col18a1P39061 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Col18a1P39061 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Col18a1P39061 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col18a1P39061 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col18a1P39061 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col18a1P39061 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Col18a1P39061 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col18a1P39061 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Gm23595-201ENSMUST00000104306 130 ntBASIC15.75■□□□□ 0.11
Col18a1P39061 Gm8111-201ENSMUST00000117659 987 ntBASIC15.75■□□□□ 0.11
Col18a1P39061 Gm3828-201ENSMUST00000121817 257 ntBASIC15.75■□□□□ 0.11
Col18a1P39061 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Gm37014-201ENSMUST00000194723 2253 ntBASIC15.75■□□□□ 0.11
Col18a1P39061 Gm5308-201ENSMUST00000196752 1354 ntBASIC15.75■□□□□ 0.11
Col18a1P39061 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC15.75■□□□□ 0.11
Col18a1P39061 Gm6518-201ENSMUST00000208450 342 ntBASIC15.75■□□□□ 0.11
Col18a1P39061 AC137871.1-201ENSMUST00000228278 475 ntBASIC15.75■□□□□ 0.11
Col18a1P39061 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Col18a1P39061 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC15.75■□□□□ 0.11
Col18a1P39061 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.75■□□□□ 0.11
Col18a1P39061 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC15.75■□□□□ 0.11
Col18a1P39061 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC15.75■□□□□ 0.11
Col18a1P39061 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Col18a1P39061 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.75■□□□□ 0.11
Col18a1P39061 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Col18a1P39061 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC15.75■□□□□ 0.11
Col18a1P39061 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC15.75■□□□□ 0.11
Col18a1P39061 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col18a1P39061 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC15.75■□□□□ 0.11
Col18a1P39061 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC15.75■□□□□ 0.11
Col18a1P39061 Gm38007-201ENSMUST00000192187 313 ntBASIC15.75■□□□□ 0.11
Col18a1P39061 Gm20781-201ENSMUST00000193154 693 ntBASIC15.75■□□□□ 0.11
Col18a1P39061 Gm21736-201ENSMUST00000195399 693 ntBASIC15.75■□□□□ 0.11
Col18a1P39061 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC15.75■□□□□ 0.11
Col18a1P39061 Gm9102-201ENSMUST00000219250 465 ntBASIC15.75■□□□□ 0.11
Col18a1P39061 Gm26782-203ENSMUST00000227103 751 ntBASIC15.75■□□□□ 0.11
Col18a1P39061 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col18a1P39061 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Col18a1P39061 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Col18a1P39061 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col18a1P39061 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Col18a1P39061 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col18a1P39061 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col18a1P39061 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col18a1P39061 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.74■□□□□ 0.11
Col18a1P39061 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col18a1P39061 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col18a1P39061 Gm44942-201ENSMUST00000096093 2072 ntBASIC15.74■□□□□ 0.11
Col18a1P39061 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
Col18a1P39061 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Col18a1P39061 Gm8152-201ENSMUST00000120842 637 ntBASIC15.74■□□□□ 0.11
Col18a1P39061 Gm15329-201ENSMUST00000121408 155 ntBASIC15.74■□□□□ 0.11
Col18a1P39061 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col18a1P39061 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC15.74■□□□□ 0.11
Col18a1P39061 Gm37284-201ENSMUST00000193607 539 ntBASIC15.74■□□□□ 0.11
Col18a1P39061 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC15.74■□□□□ 0.11
Col18a1P39061 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC15.74■□□□□ 0.11
Col18a1P39061 CT030166.5-201ENSMUST00000222249 420 ntBASIC15.74■□□□□ 0.11
Col18a1P39061 AC187103.3-201ENSMUST00000225725 646 ntBASIC15.74■□□□□ 0.11
Col18a1P39061 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC15.74■□□□□ 0.11
Col18a1P39061 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Col18a1P39061 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col18a1P39061 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Col18a1P39061 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col18a1P39061 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms