Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cdh4P39038 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cdh4P39038 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.72□□□□□ -0.53
Cdh4P39038 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.72□□□□□ -0.53
Cdh4P39038 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.72□□□□□ -0.53
Cdh4P39038 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cdh4P39038 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.72□□□□□ -0.53
Cdh4P39038 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cdh4P39038 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.72□□□□□ -0.53
Cdh4P39038 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Gm15276-201ENSMUST00000145953 498 ntBASIC11.72□□□□□ -0.53
Cdh4P39038 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Gm26083-201ENSMUST00000157904 193 ntBASIC11.72□□□□□ -0.53
Cdh4P39038 Gm17376-201ENSMUST00000166016 84 ntBASIC11.72□□□□□ -0.53
Cdh4P39038 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.72□□□□□ -0.53
Cdh4P39038 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.72□□□□□ -0.53
Cdh4P39038 Gm13097-201ENSMUST00000210722 397 ntBASIC11.72□□□□□ -0.53
Cdh4P39038 Gm6082-201ENSMUST00000215204 454 ntBASIC11.72□□□□□ -0.53
Cdh4P39038 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cdh4P39038 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.72□□□□□ -0.53
Cdh4P39038 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.72□□□□□ -0.53
Cdh4P39038 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cdh4P39038 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cdh4P39038 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cdh4P39038 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cdh4P39038 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Cdh4P39038 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Cdh4P39038 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh4P39038 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh4P39038 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh4P39038 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh4P39038 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh4P39038 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh4P39038 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.71□□□□□ -0.53
Cdh4P39038 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh4P39038 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cdh4P39038 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh4P39038 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cdh4P39038 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.71□□□□□ -0.53
Cdh4P39038 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh4P39038 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh4P39038 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.71□□□□□ -0.53
Cdh4P39038 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.71□□□□□ -0.53
Cdh4P39038 Gm8885-201ENSMUST00000189382 598 ntBASIC11.71□□□□□ -0.53
Cdh4P39038 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Cdh4P39038 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.71□□□□□ -0.53
Cdh4P39038 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.71□□□□□ -0.53
Cdh4P39038 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.71□□□□□ -0.53
Cdh4P39038 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh4P39038 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh4P39038 Gm9996-201ENSMUST00000070359 913 ntBASIC11.71□□□□□ -0.53
Cdh4P39038 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cdh4P39038 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh4P39038 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh4P39038 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
Cdh4P39038 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh4P39038 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cdh4P39038 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh4P39038 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.54
Cdh4P39038 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh4P39038 Cog3-203ENSMUST00000227473 4197 ntBASIC11.71□□□□□ -0.54
Cdh4P39038 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.71□□□□□ -0.54
Cdh4P39038 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh4P39038 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh4P39038 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh4P39038 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.71□□□□□ -0.54
Cdh4P39038 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.71□□□□□ -0.54
Cdh4P39038 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh4P39038 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cdh4P39038 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cdh4P39038 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdh4P39038 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cdh4P39038 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms