Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.58□□□□□ -0.4
Nfkb1P25799 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.58□□□□□ -0.4
Nfkb1P25799 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Nfkb1P25799 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nfkb1P25799 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.57□□□□□ -0.4
Nfkb1P25799 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.57□□□□□ -0.4
Nfkb1P25799 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.57□□□□□ -0.4
Nfkb1P25799 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Nfkb1P25799 Gm28071-201ENSMUST00000190355 478 ntBASIC12.57□□□□□ -0.4
Nfkb1P25799 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.57□□□□□ -0.4
Nfkb1P25799 Gm43962-201ENSMUST00000203898 190 ntBASIC12.57□□□□□ -0.4
Nfkb1P25799 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nfkb1P25799 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nfkb1P25799 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nfkb1P25799 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.57□□□□□ -0.4
Nfkb1P25799 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nfkb1P25799 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nfkb1P25799 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nfkb1P25799 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nfkb1P25799 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nfkb1P25799 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nfkb1P25799 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nfkb1P25799 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.56□□□□□ -0.4
Nfkb1P25799 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.56□□□□□ -0.4
Nfkb1P25799 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nfkb1P25799 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nfkb1P25799 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nfkb1P25799 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.56□□□□□ -0.4
Nfkb1P25799 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nfkb1P25799 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.56□□□□□ -0.4
Nfkb1P25799 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Nfkb1P25799 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nfkb1P25799 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Nfkb1P25799 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
Nfkb1P25799 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.56□□□□□ -0.4
Nfkb1P25799 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.56□□□□□ -0.4
Nfkb1P25799 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nfkb1P25799 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.56□□□□□ -0.4
Nfkb1P25799 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nfkb1P25799 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nfkb1P25799 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Nfkb1P25799 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nfkb1P25799 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nfkb1P25799 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Nfkb1P25799 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nfkb1P25799 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Nfkb1P25799 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nfkb1P25799 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nfkb1P25799 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nfkb1P25799 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nfkb1P25799 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.55□□□□□ -0.4
Nfkb1P25799 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nfkb1P25799 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.55□□□□□ -0.4
Nfkb1P25799 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nfkb1P25799 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nfkb1P25799 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms