Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cbx3P23198 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cbx3P23198 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cbx3P23198 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cbx3P23198 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cbx3P23198 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.12□□□□□ -0.63
Cbx3P23198 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cbx3P23198 Gm28581-201ENSMUST00000186086 2177 ntBASIC11.12□□□□□ -0.63
Cbx3P23198 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cbx3P23198 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cbx3P23198 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.12□□□□□ -0.63
Cbx3P23198 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Cbx3P23198 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.12□□□□□ -0.63
Cbx3P23198 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cbx3P23198 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.12□□□□□ -0.63
Cbx3P23198 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.12□□□□□ -0.63
Cbx3P23198 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.12□□□□□ -0.63
Cbx3P23198 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cbx3P23198 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.12□□□□□ -0.63
Cbx3P23198 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cbx3P23198 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.12□□□□□ -0.63
Cbx3P23198 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.12□□□□□ -0.63
Cbx3P23198 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cbx3P23198 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.11□□□□□ -0.63
Cbx3P23198 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.11□□□□□ -0.63
Cbx3P23198 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Cbx3P23198 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Cbx3P23198 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cbx3P23198 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cbx3P23198 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.11□□□□□ -0.63
Cbx3P23198 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.11□□□□□ -0.63
Cbx3P23198 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Cbx3P23198 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.11□□□□□ -0.63
Cbx3P23198 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Gm27680-201ENSMUST00000184192 160 ntBASIC11.11□□□□□ -0.63
Cbx3P23198 Gm18905-201ENSMUST00000205454 928 ntBASIC11.11□□□□□ -0.63
Cbx3P23198 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.11□□□□□ -0.63
Cbx3P23198 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cbx3P23198 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms