Protein–RNA interactions for Protein: P10287

Cdh3, Cadherin-3, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh3P10287 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh3P10287 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cdh3P10287 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh3P10287 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cdh3P10287 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cdh3P10287 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.36□□□□□ -0.59
Cdh3P10287 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh3P10287 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh3P10287 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdh3P10287 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh3P10287 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh3P10287 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdh3P10287 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh3P10287 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh3P10287 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh3P10287 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.36□□□□□ -0.59
Cdh3P10287 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh3P10287 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh3P10287 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh3P10287 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdh3P10287 Btrc-209ENSMUST00000224478 2194 ntBASIC11.35□□□□□ -0.59
Cdh3P10287 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Cdh3P10287 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdh3P10287 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdh3P10287 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cdh3P10287 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdh3P10287 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdh3P10287 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cdh3P10287 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Cdh3P10287 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.35□□□□□ -0.59
Cdh3P10287 Gm12384-201ENSMUST00000119228 919 ntBASIC11.35□□□□□ -0.59
Cdh3P10287 Gm14704-201ENSMUST00000120300 874 ntBASIC11.35□□□□□ -0.59
Cdh3P10287 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.35□□□□□ -0.59
Cdh3P10287 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.35□□□□□ -0.59
Cdh3P10287 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.35□□□□□ -0.59
Cdh3P10287 Gm20614-201ENSMUST00000177106 632 ntBASIC11.35□□□□□ -0.59
Cdh3P10287 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Cdh3P10287 Mir7085-201ENSMUST00000184353 66 ntBASIC11.35□□□□□ -0.59
Cdh3P10287 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.35□□□□□ -0.59
Cdh3P10287 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdh3P10287 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.35□□□□□ -0.59
Cdh3P10287 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdh3P10287 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.35□□□□□ -0.59
Cdh3P10287 BC043934-202ENSMUST00000185694 2356 ntBASIC11.35□□□□□ -0.59
Cdh3P10287 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdh3P10287 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Cdh3P10287 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh3P10287 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.35□□□□□ -0.59
Cdh3P10287 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Cdh3P10287 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh3P10287 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cdh3P10287 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh3P10287 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh3P10287 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh3P10287 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdh3P10287 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cdh3P10287 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh3P10287 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.34□□□□□ -0.59
Cdh3P10287 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh3P10287 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh3P10287 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdh3P10287 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.34□□□□□ -0.59
Cdh3P10287 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.34□□□□□ -0.59
Cdh3P10287 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cdh3P10287 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.34□□□□□ -0.59
Cdh3P10287 Gm11637-201ENSMUST00000120601 592 ntBASIC11.34□□□□□ -0.59
Cdh3P10287 Gm12363-201ENSMUST00000122250 668 ntBASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms