Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC15.75■□□□□ 0.11
Hoxc9P09633 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Hoxc9P09633 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC15.75■□□□□ 0.11
Hoxc9P09633 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC15.75■□□□□ 0.11
Hoxc9P09633 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc9P09633 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Hoxc9P09633 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC15.74■□□□□ 0.11
Hoxc9P09633 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Gm12795-201ENSMUST00000117594 539 ntBASIC15.74■□□□□ 0.11
Hoxc9P09633 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Hoxc9P09633 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Hoxc9P09633 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Gm23153-201ENSMUST00000175323 313 ntBASIC15.74■□□□□ 0.11
Hoxc9P09633 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC15.74■□□□□ 0.11
Hoxc9P09633 Gm28388-201ENSMUST00000186262 437 ntBASIC15.74■□□□□ 0.11
Hoxc9P09633 Gm9645-201ENSMUST00000197131 792 ntBASIC15.74■□□□□ 0.11
Hoxc9P09633 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC15.74■□□□□ 0.11
Hoxc9P09633 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC15.74■□□□□ 0.11
Hoxc9P09633 Gm2553-201ENSMUST00000215986 605 ntBASIC15.74■□□□□ 0.11
Hoxc9P09633 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC15.74■□□□□ 0.11
Hoxc9P09633 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Hoxc9P09633 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC15.74■□□□□ 0.11
Hoxc9P09633 Gm8155-201ENSMUST00000216363 1612 ntBASIC15.74■□□□□ 0.11
Hoxc9P09633 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Hoxc9P09633 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Hoxc9P09633 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Hoxc9P09633 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC15.74■□□□□ 0.11
Hoxc9P09633 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc9P09633 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc9P09633 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Hoxc9P09633 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc9P09633 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC15.73■□□□□ 0.11
Hoxc9P09633 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.73■□□□□ 0.11
Hoxc9P09633 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc9P09633 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Hoxc9P09633 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc9P09633 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc9P09633 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Hoxc9P09633 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
Hoxc9P09633 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc9P09633 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Hoxc9P09633 Gm1848-201ENSMUST00000120711 789 ntBASIC15.73■□□□□ 0.11
Hoxc9P09633 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc9P09633 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Hoxc9P09633 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc9P09633 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc9P09633 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC15.73■□□□□ 0.11
Hoxc9P09633 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC15.73■□□□□ 0.11
Hoxc9P09633 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Hoxc9P09633 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Hoxc9P09633 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC15.73■□□□□ 0.11
Hoxc9P09633 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC15.73■□□□□ 0.11
Hoxc9P09633 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC15.73■□□□□ 0.11
Hoxc9P09633 AC112945.1-201ENSMUST00000226413 514 ntBASIC15.73■□□□□ 0.11
Hoxc9P09633 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc9P09633 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Hoxc9P09633 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Hoxc9P09633 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc9P09633 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc9P09633 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc9P09633 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc9P09633 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc9P09633 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc9P09633 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc9P09633 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Hoxc9P09633 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Hoxc9P09633 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc9P09633 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxc9P09633 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Hoxc9P09633 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxc9P09633 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms