Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubr1O70481 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubr1O70481 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ubr1O70481 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ubr1O70481 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Gm29155-201ENSMUST00000185910 269 ntBASIC15.54■□□□□ 0.08
Ubr1O70481 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
Ubr1O70481 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC15.54■□□□□ 0.08
Ubr1O70481 Gm45594-201ENSMUST00000211717 241 ntBASIC15.54■□□□□ 0.08
Ubr1O70481 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC15.54■□□□□ 0.08
Ubr1O70481 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ubr1O70481 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.54■□□□□ 0.08
Ubr1O70481 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ubr1O70481 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC15.54■□□□□ 0.08
Ubr1O70481 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC15.54■□□□□ 0.08
Ubr1O70481 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC15.54■□□□□ 0.08
Ubr1O70481 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC15.54■□□□□ 0.08
Ubr1O70481 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC15.54■□□□□ 0.08
Ubr1O70481 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ubr1O70481 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubr1O70481 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
Ubr1O70481 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ubr1O70481 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ubr1O70481 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ubr1O70481 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.53■□□□□ 0.08
Ubr1O70481 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubr1O70481 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubr1O70481 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC15.53■□□□□ 0.08
Ubr1O70481 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubr1O70481 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubr1O70481 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ubr1O70481 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubr1O70481 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ubr1O70481 Gm14395-201ENSMUST00000120494 563 ntBASIC15.53■□□□□ 0.08
Ubr1O70481 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC15.53■□□□□ 0.08
Ubr1O70481 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Ubr1O70481 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubr1O70481 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC15.53■□□□□ 0.08
Ubr1O70481 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ubr1O70481 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubr1O70481 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubr1O70481 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubr1O70481 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubr1O70481 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubr1O70481 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubr1O70481 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubr1O70481 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ubr1O70481 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC15.53■□□□□ 0.08
Ubr1O70481 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.53■□□□□ 0.08
Ubr1O70481 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ubr1O70481 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ubr1O70481 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ubr1O70481 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC15.52■□□□□ 0.08
Ubr1O70481 Rn7s6-201ENSMUST00000175005 291 ntBASIC15.52■□□□□ 0.08
Ubr1O70481 Gm43852-201ENSMUST00000202098 917 ntBASIC15.52■□□□□ 0.08
Ubr1O70481 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ubr1O70481 Gm30671-201ENSMUST00000214898 318 ntBASIC15.52■□□□□ 0.08
Ubr1O70481 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ubr1O70481 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ubr1O70481 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ubr1O70481 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ubr1O70481 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC15.52■□□□□ 0.08
Ubr1O70481 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ubr1O70481 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC15.52■□□□□ 0.07
Ubr1O70481 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ubr1O70481 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ubr1O70481 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ubr1O70481 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ubr1O70481 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Ubr1O70481 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Ubr1O70481 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ubr1O70481 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ubr1O70481 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ubr1O70481 AC138329.2-201ENSMUST00000225579 1842 ntBASIC15.52■□□□□ 0.07
Ubr1O70481 Gm12990-201ENSMUST00000120372 468 ntBASIC15.52■□□□□ 0.07
Ubr1O70481 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms