Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
MsmbO08540 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
MsmbO08540 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC9.41□□□□□ -0.9
MsmbO08540 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Gm4760-201ENSMUST00000119663 1030 ntBASIC9.41□□□□□ -0.9
MsmbO08540 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC9.41□□□□□ -0.9
MsmbO08540 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
MsmbO08540 Gm15276-201ENSMUST00000145953 498 ntBASIC9.41□□□□□ -0.9
MsmbO08540 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Mir5132-201ENSMUST00000175166 71 ntBASIC9.41□□□□□ -0.9
MsmbO08540 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC9.41□□□□□ -0.9
MsmbO08540 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC9.41□□□□□ -0.9
MsmbO08540 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Gm44262-201ENSMUST00000204969 372 ntBASIC9.41□□□□□ -0.9
MsmbO08540 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
MsmbO08540 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC9.41□□□□□ -0.9
MsmbO08540 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
MsmbO08540 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC9.41□□□□□ -0.9
MsmbO08540 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
MsmbO08540 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
MsmbO08540 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
MsmbO08540 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
MsmbO08540 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC9.4□□□□□ -0.9
MsmbO08540 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
MsmbO08540 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC9.4□□□□□ -0.9
MsmbO08540 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 Gm37472-201ENSMUST00000192342 4052 ntBASIC9.4□□□□□ -0.9
MsmbO08540 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 Gm10305-201ENSMUST00000195331 2475 ntBASIC9.4□□□□□ -0.9
MsmbO08540 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
MsmbO08540 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
MsmbO08540 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
MsmbO08540 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
MsmbO08540 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.9
MsmbO08540 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
MsmbO08540 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC9.4□□□□□ -0.9
MsmbO08540 Gm5070-201ENSMUST00000177599 862 ntBASIC9.4□□□□□ -0.9
MsmbO08540 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 Gm44958-201ENSMUST00000203734 736 ntBASIC9.4□□□□□ -0.9
MsmbO08540 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC9.4□□□□□ -0.9
MsmbO08540 Gm7293-201ENSMUST00000216682 1007 ntBASIC9.4□□□□□ -0.9
MsmbO08540 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC9.4□□□□□ -0.9
MsmbO08540 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC9.4□□□□□ -0.9
MsmbO08540 AC126253.1-202ENSMUST00000226732 835 ntBASIC9.4□□□□□ -0.9
MsmbO08540 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
MsmbO08540 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 AC122197.2-201ENSMUST00000219196 1635 ntBASIC9.4□□□□□ -0.9
MsmbO08540 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
MsmbO08540 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.9
MsmbO08540 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
MsmbO08540 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
MsmbO08540 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
MsmbO08540 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms