Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm11450-201ENSMUST00000121144 333 ntBASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Spcs1-203ENSMUST00000226374 592 ntBASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Srp54bE9PXC0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Gm9062-201ENSMUST00000117712 727 ntBASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Gm13611-201ENSMUST00000118269 318 ntBASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Mir7677-201ENSMUST00000184226 67 ntBASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Srp54bE9PXC0 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Gm22334-201ENSMUST00000158070 133 ntBASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Gm23699-201ENSMUST00000158835 135 ntBASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Gm270-201ENSMUST00000223010 976 ntBASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Srp54bE9PXC0 Gm5455-201ENSMUST00000058710 715 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms