Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Gm13611-201ENSMUST00000118269 318 ntBASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Gm24845-201ENSMUST00000158034 109 ntBASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Mir1943-201ENSMUST00000158276 73 ntBASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Gm28882-201ENSMUST00000185504 314 ntBASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cfap99A0A140LIX9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Gm9630-201ENSMUST00000178304 885 ntBASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Gm3508-201ENSMUST00000186012 792 ntBASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Gm7003-201ENSMUST00000195089 312 ntBASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cfap99A0A140LIX9 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Gm9550-201ENSMUST00000161130 862 ntBASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Gm44124-201ENSMUST00000204159 472 ntBASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms