Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Trav7n-4A0A075B620 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Trav7n-4A0A075B620 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Gm16342-201ENSMUST00000124025 1025 ntBASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Rmrp-201ENSMUST00000157463 271 ntBASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Gm38294-201ENSMUST00000192831 381 ntBASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Gm37277-201ENSMUST00000194052 1111 ntBASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 AC154767.3-201ENSMUST00000225150 1342 ntBASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Trav7n-4A0A075B620 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Trav7n-4A0A075B620 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav7n-4A0A075B620 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav7n-4A0A075B620 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav7n-4A0A075B620 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav7n-4A0A075B620 Gm10548-201ENSMUST00000097631 2629 ntBASIC9.2□□□□□ -0.94
Trav7n-4A0A075B620 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Trav7n-4A0A075B620 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.2□□□□□ -0.94
Trav7n-4A0A075B620 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Trav7n-4A0A075B620 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC9.2□□□□□ -0.94
Trav7n-4A0A075B620 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
Trav7n-4A0A075B620 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms