Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.59■■□□□ 1.05
COMMD3-BMI1R4GMX3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.59■■□□□ 1.05
COMMD3-BMI1R4GMX3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.59■■□□□ 1.05
COMMD3-BMI1R4GMX3 AL359258.2-201ENST00000564063 1566 ntBASIC21.58■■□□□ 1.05
COMMD3-BMI1R4GMX3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COMMD3-BMI1R4GMX3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
COMMD3-BMI1R4GMX3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COMMD3-BMI1R4GMX3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COMMD3-BMI1R4GMX3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.58■■□□□ 1.04
COMMD3-BMI1R4GMX3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COMMD3-BMI1R4GMX3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
COMMD3-BMI1R4GMX3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
COMMD3-BMI1R4GMX3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COMMD3-BMI1R4GMX3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
COMMD3-BMI1R4GMX3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COMMD3-BMI1R4GMX3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.57■■□□□ 1.04
COMMD3-BMI1R4GMX3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COMMD3-BMI1R4GMX3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COMMD3-BMI1R4GMX3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.57■■□□□ 1.04
COMMD3-BMI1R4GMX3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.57■■□□□ 1.04
COMMD3-BMI1R4GMX3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.57■■□□□ 1.04
COMMD3-BMI1R4GMX3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.57■■□□□ 1.04
COMMD3-BMI1R4GMX3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COMMD3-BMI1R4GMX3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
COMMD3-BMI1R4GMX3 FOXO3B-201ENST00000395675 1928 ntBASIC21.57■■□□□ 1.04
COMMD3-BMI1R4GMX3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COMMD3-BMI1R4GMX3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
COMMD3-BMI1R4GMX3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COMMD3-BMI1R4GMX3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
COMMD3-BMI1R4GMX3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COMMD3-BMI1R4GMX3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COMMD3-BMI1R4GMX3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COMMD3-BMI1R4GMX3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.56■■□□□ 1.04
COMMD3-BMI1R4GMX3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
COMMD3-BMI1R4GMX3 AC004812.2-201ENST00000611079 2094 ntBASIC21.56■■□□□ 1.04
COMMD3-BMI1R4GMX3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.55■■□□□ 1.04
COMMD3-BMI1R4GMX3 ABHD17AP4-201ENST00000411545 909 ntBASIC21.55■■□□□ 1.04
COMMD3-BMI1R4GMX3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COMMD3-BMI1R4GMX3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COMMD3-BMI1R4GMX3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COMMD3-BMI1R4GMX3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.54■■□□□ 1.04
COMMD3-BMI1R4GMX3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COMMD3-BMI1R4GMX3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COMMD3-BMI1R4GMX3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COMMD3-BMI1R4GMX3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.54■■□□□ 1.04
COMMD3-BMI1R4GMX3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.54■■□□□ 1.04
COMMD3-BMI1R4GMX3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
COMMD3-BMI1R4GMX3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COMMD3-BMI1R4GMX3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COMMD3-BMI1R4GMX3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.53■■□□□ 1.04
COMMD3-BMI1R4GMX3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.53■■□□□ 1.04
COMMD3-BMI1R4GMX3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
COMMD3-BMI1R4GMX3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.53■■□□□ 1.04
COMMD3-BMI1R4GMX3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COMMD3-BMI1R4GMX3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COMMD3-BMI1R4GMX3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COMMD3-BMI1R4GMX3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COMMD3-BMI1R4GMX3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
COMMD3-BMI1R4GMX3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
COMMD3-BMI1R4GMX3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.52■■□□□ 1.04
COMMD3-BMI1R4GMX3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COMMD3-BMI1R4GMX3 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.52■■□□□ 1.04
COMMD3-BMI1R4GMX3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COMMD3-BMI1R4GMX3 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.52■■□□□ 1.04
COMMD3-BMI1R4GMX3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COMMD3-BMI1R4GMX3 AL137060.1-201ENST00000618151 2648 ntBASIC21.52■■□□□ 1.04
COMMD3-BMI1R4GMX3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COMMD3-BMI1R4GMX3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.52■■□□□ 1.03
COMMD3-BMI1R4GMX3 AL359504.2-201ENST00000605506 1601 ntBASIC21.51■■□□□ 1.03
COMMD3-BMI1R4GMX3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
COMMD3-BMI1R4GMX3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COMMD3-BMI1R4GMX3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.51■■□□□ 1.03
COMMD3-BMI1R4GMX3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
COMMD3-BMI1R4GMX3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COMMD3-BMI1R4GMX3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COMMD3-BMI1R4GMX3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COMMD3-BMI1R4GMX3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COMMD3-BMI1R4GMX3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COMMD3-BMI1R4GMX3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COMMD3-BMI1R4GMX3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.5■■□□□ 1.03
COMMD3-BMI1R4GMX3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.5■■□□□ 1.03
COMMD3-BMI1R4GMX3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.5■■□□□ 1.03
COMMD3-BMI1R4GMX3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COMMD3-BMI1R4GMX3 MIR3648-2-201ENST00000581792 180 ntBASIC21.5■■□□□ 1.03
COMMD3-BMI1R4GMX3 MIR3648-1-201ENST00000615959 180 ntBASIC21.5■■□□□ 1.03
COMMD3-BMI1R4GMX3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
COMMD3-BMI1R4GMX3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.5■■□□□ 1.03
COMMD3-BMI1R4GMX3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COMMD3-BMI1R4GMX3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COMMD3-BMI1R4GMX3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COMMD3-BMI1R4GMX3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
COMMD3-BMI1R4GMX3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COMMD3-BMI1R4GMX3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COMMD3-BMI1R4GMX3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COMMD3-BMI1R4GMX3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
COMMD3-BMI1R4GMX3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COMMD3-BMI1R4GMX3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COMMD3-BMI1R4GMX3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COMMD3-BMI1R4GMX3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
COMMD3-BMI1R4GMX3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms