Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Smarcb1Q9Z0H3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smarcb1Q9Z0H3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarcb1Q9Z0H3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarcb1Q9Z0H3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.68■■□□□ 1.06
Smarcb1Q9Z0H3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarcb1Q9Z0H3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Smarcb1Q9Z0H3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Smarcb1Q9Z0H3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Smarcb1Q9Z0H3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarcb1Q9Z0H3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Smarcb1Q9Z0H3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.66■■□□□ 1.06
Smarcb1Q9Z0H3 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.66■■□□□ 1.06
Smarcb1Q9Z0H3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smarcb1Q9Z0H3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.66■■□□□ 1.06
Smarcb1Q9Z0H3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Smarcb1Q9Z0H3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarcb1Q9Z0H3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarcb1Q9Z0H3 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.65■■□□□ 1.06
Smarcb1Q9Z0H3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Smarcb1Q9Z0H3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Smarcb1Q9Z0H3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarcb1Q9Z0H3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smarcb1Q9Z0H3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smarcb1Q9Z0H3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Smarcb1Q9Z0H3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.64■■□□□ 1.05
Smarcb1Q9Z0H3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Smarcb1Q9Z0H3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarcb1Q9Z0H3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarcb1Q9Z0H3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarcb1Q9Z0H3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smarcb1Q9Z0H3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarcb1Q9Z0H3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.63■■□□□ 1.05
Smarcb1Q9Z0H3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarcb1Q9Z0H3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smarcb1Q9Z0H3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smarcb1Q9Z0H3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.62■■□□□ 1.05
Smarcb1Q9Z0H3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smarcb1Q9Z0H3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Smarcb1Q9Z0H3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarcb1Q9Z0H3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarcb1Q9Z0H3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smarcb1Q9Z0H3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smarcb1Q9Z0H3 Gm27454-201ENSMUST00000185090 204 ntBASIC21.61■■□□□ 1.05
Smarcb1Q9Z0H3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarcb1Q9Z0H3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Smarcb1Q9Z0H3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Smarcb1Q9Z0H3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Smarcb1Q9Z0H3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarcb1Q9Z0H3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Smarcb1Q9Z0H3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Smarcb1Q9Z0H3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarcb1Q9Z0H3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcb1Q9Z0H3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcb1Q9Z0H3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcb1Q9Z0H3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcb1Q9Z0H3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcb1Q9Z0H3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcb1Q9Z0H3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcb1Q9Z0H3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Smarcb1Q9Z0H3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcb1Q9Z0H3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcb1Q9Z0H3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smarcb1Q9Z0H3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smarcb1Q9Z0H3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.58■■□□□ 1.05
Smarcb1Q9Z0H3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Smarcb1Q9Z0H3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smarcb1Q9Z0H3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Smarcb1Q9Z0H3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smarcb1Q9Z0H3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smarcb1Q9Z0H3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smarcb1Q9Z0H3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Smarcb1Q9Z0H3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Smarcb1Q9Z0H3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.56■■□□□ 1.04
Smarcb1Q9Z0H3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smarcb1Q9Z0H3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smarcb1Q9Z0H3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.56■■□□□ 1.04
Smarcb1Q9Z0H3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smarcb1Q9Z0H3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.56■■□□□ 1.04
Smarcb1Q9Z0H3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Smarcb1Q9Z0H3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.56■■□□□ 1.04
Smarcb1Q9Z0H3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Smarcb1Q9Z0H3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.55■■□□□ 1.04
Smarcb1Q9Z0H3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smarcb1Q9Z0H3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smarcb1Q9Z0H3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smarcb1Q9Z0H3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smarcb1Q9Z0H3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smarcb1Q9Z0H3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smarcb1Q9Z0H3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.55■■□□□ 1.04
Smarcb1Q9Z0H3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Smarcb1Q9Z0H3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Smarcb1Q9Z0H3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smarcb1Q9Z0H3 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.54■■□□□ 1.04
Smarcb1Q9Z0H3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Smarcb1Q9Z0H3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.54■■□□□ 1.04
Smarcb1Q9Z0H3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smarcb1Q9Z0H3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smarcb1Q9Z0H3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Smarcb1Q9Z0H3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms