Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.02■□□□□ 0.96
Cldn3Q9Z0G9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Cldn3Q9Z0G9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn3Q9Z0G9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Cldn3Q9Z0G9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cldn3Q9Z0G9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cldn3Q9Z0G9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn3Q9Z0G9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn3Q9Z0G9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn3Q9Z0G9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn3Q9Z0G9 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.01■□□□□ 0.95
Cldn3Q9Z0G9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21■□□□□ 0.95
Cldn3Q9Z0G9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cldn3Q9Z0G9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cldn3Q9Z0G9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cldn3Q9Z0G9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21■□□□□ 0.95
Cldn3Q9Z0G9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cldn3Q9Z0G9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cldn3Q9Z0G9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cldn3Q9Z0G9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn3Q9Z0G9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.99■□□□□ 0.95
Cldn3Q9Z0G9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.99■□□□□ 0.95
Cldn3Q9Z0G9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn3Q9Z0G9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn3Q9Z0G9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn3Q9Z0G9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn3Q9Z0G9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn3Q9Z0G9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Cldn3Q9Z0G9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn3Q9Z0G9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn3Q9Z0G9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn3Q9Z0G9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn3Q9Z0G9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn3Q9Z0G9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Cldn3Q9Z0G9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn3Q9Z0G9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn3Q9Z0G9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn3Q9Z0G9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn3Q9Z0G9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn3Q9Z0G9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cldn3Q9Z0G9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Cldn3Q9Z0G9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.95■□□□□ 0.94
Cldn3Q9Z0G9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn3Q9Z0G9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn3Q9Z0G9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cldn3Q9Z0G9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn3Q9Z0G9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn3Q9Z0G9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Cldn3Q9Z0G9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn3Q9Z0G9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn3Q9Z0G9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn3Q9Z0G9 Gm40881-201ENSMUST00000223397 166 ntBASIC20.94■□□□□ 0.94
Cldn3Q9Z0G9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn3Q9Z0G9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn3Q9Z0G9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn3Q9Z0G9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.94■□□□□ 0.94
Cldn3Q9Z0G9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn3Q9Z0G9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cldn3Q9Z0G9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn3Q9Z0G9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cldn3Q9Z0G9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
Cldn3Q9Z0G9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.93■□□□□ 0.94
Cldn3Q9Z0G9 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.93■□□□□ 0.94
Cldn3Q9Z0G9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn3Q9Z0G9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
Cldn3Q9Z0G9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn3Q9Z0G9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cldn3Q9Z0G9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn3Q9Z0G9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cldn3Q9Z0G9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn3Q9Z0G9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.92■□□□□ 0.94
Cldn3Q9Z0G9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn3Q9Z0G9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn3Q9Z0G9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn3Q9Z0G9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.91■□□□□ 0.94
Cldn3Q9Z0G9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn3Q9Z0G9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Cldn3Q9Z0G9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.91■□□□□ 0.94
Cldn3Q9Z0G9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn3Q9Z0G9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn3Q9Z0G9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn3Q9Z0G9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn3Q9Z0G9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn3Q9Z0G9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn3Q9Z0G9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn3Q9Z0G9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn3Q9Z0G9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.9■□□□□ 0.94
Cldn3Q9Z0G9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn3Q9Z0G9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.9■□□□□ 0.94
Cldn3Q9Z0G9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.9■□□□□ 0.94
Cldn3Q9Z0G9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn3Q9Z0G9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Cldn3Q9Z0G9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cldn3Q9Z0G9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Cldn3Q9Z0G9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn3Q9Z0G9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn3Q9Z0G9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn3Q9Z0G9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn3Q9Z0G9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cldn3Q9Z0G9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms