Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ClcnkaQ9WUB7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ClcnkaQ9WUB7 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.09■□□□□ 0.65
ClcnkaQ9WUB7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ClcnkaQ9WUB7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ClcnkaQ9WUB7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
ClcnkaQ9WUB7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ClcnkaQ9WUB7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ClcnkaQ9WUB7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
ClcnkaQ9WUB7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ClcnkaQ9WUB7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ClcnkaQ9WUB7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ClcnkaQ9WUB7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ClcnkaQ9WUB7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ClcnkaQ9WUB7 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.07■□□□□ 0.64
ClcnkaQ9WUB7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ClcnkaQ9WUB7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.07■□□□□ 0.64
ClcnkaQ9WUB7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ClcnkaQ9WUB7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ClcnkaQ9WUB7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ClcnkaQ9WUB7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
ClcnkaQ9WUB7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ClcnkaQ9WUB7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ClcnkaQ9WUB7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ClcnkaQ9WUB7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ClcnkaQ9WUB7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ClcnkaQ9WUB7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ClcnkaQ9WUB7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ClcnkaQ9WUB7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ClcnkaQ9WUB7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ClcnkaQ9WUB7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ClcnkaQ9WUB7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ClcnkaQ9WUB7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ClcnkaQ9WUB7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ClcnkaQ9WUB7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ClcnkaQ9WUB7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ClcnkaQ9WUB7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ClcnkaQ9WUB7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ClcnkaQ9WUB7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ClcnkaQ9WUB7 Gm10232-201ENSMUST00000089221 720 ntBASIC19.04■□□□□ 0.64
ClcnkaQ9WUB7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ClcnkaQ9WUB7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ClcnkaQ9WUB7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ClcnkaQ9WUB7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ClcnkaQ9WUB7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ClcnkaQ9WUB7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.04■□□□□ 0.64
ClcnkaQ9WUB7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ClcnkaQ9WUB7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ClcnkaQ9WUB7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
ClcnkaQ9WUB7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ClcnkaQ9WUB7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ClcnkaQ9WUB7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.03■□□□□ 0.64
ClcnkaQ9WUB7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ClcnkaQ9WUB7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
ClcnkaQ9WUB7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
ClcnkaQ9WUB7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.02■□□□□ 0.64
ClcnkaQ9WUB7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ClcnkaQ9WUB7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
ClcnkaQ9WUB7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ClcnkaQ9WUB7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ClcnkaQ9WUB7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ClcnkaQ9WUB7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.63
ClcnkaQ9WUB7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ClcnkaQ9WUB7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
ClcnkaQ9WUB7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ClcnkaQ9WUB7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ClcnkaQ9WUB7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
ClcnkaQ9WUB7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ClcnkaQ9WUB7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ClcnkaQ9WUB7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ClcnkaQ9WUB7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ClcnkaQ9WUB7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19■□□□□ 0.63
ClcnkaQ9WUB7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ClcnkaQ9WUB7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ClcnkaQ9WUB7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19■□□□□ 0.63
ClcnkaQ9WUB7 Gm5812-201ENSMUST00000061073 957 ntBASIC19■□□□□ 0.63
ClcnkaQ9WUB7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ClcnkaQ9WUB7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19■□□□□ 0.63
ClcnkaQ9WUB7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ClcnkaQ9WUB7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ClcnkaQ9WUB7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ClcnkaQ9WUB7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ClcnkaQ9WUB7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.99■□□□□ 0.63
ClcnkaQ9WUB7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
ClcnkaQ9WUB7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ClcnkaQ9WUB7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
ClcnkaQ9WUB7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ClcnkaQ9WUB7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ClcnkaQ9WUB7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ClcnkaQ9WUB7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ClcnkaQ9WUB7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
ClcnkaQ9WUB7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
ClcnkaQ9WUB7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClcnkaQ9WUB7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClcnkaQ9WUB7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClcnkaQ9WUB7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClcnkaQ9WUB7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ClcnkaQ9WUB7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ClcnkaQ9WUB7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClcnkaQ9WUB7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms