Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Scn8aQ9WTU3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Scn8aQ9WTU3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scn8aQ9WTU3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Scn8aQ9WTU3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.22■□□□□ 0.99
Scn8aQ9WTU3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Scn8aQ9WTU3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.22■□□□□ 0.99
Scn8aQ9WTU3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Scn8aQ9WTU3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Scn8aQ9WTU3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scn8aQ9WTU3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scn8aQ9WTU3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scn8aQ9WTU3 Golgb1-201ENSMUST00000023534 498 ntBASIC21.21■□□□□ 0.99
Scn8aQ9WTU3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn8aQ9WTU3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn8aQ9WTU3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Scn8aQ9WTU3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn8aQ9WTU3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn8aQ9WTU3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Scn8aQ9WTU3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Scn8aQ9WTU3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.21■□□□□ 0.99
Scn8aQ9WTU3 Gm9847-201ENSMUST00000052528 599 ntBASIC21.21■□□□□ 0.99
Scn8aQ9WTU3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Scn8aQ9WTU3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scn8aQ9WTU3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.2■□□□□ 0.98
Scn8aQ9WTU3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn8aQ9WTU3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn8aQ9WTU3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.19■□□□□ 0.98
Scn8aQ9WTU3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.19■□□□□ 0.98
Scn8aQ9WTU3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn8aQ9WTU3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn8aQ9WTU3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Scn8aQ9WTU3 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.19■□□□□ 0.98
Scn8aQ9WTU3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.19■□□□□ 0.98
Scn8aQ9WTU3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn8aQ9WTU3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn8aQ9WTU3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn8aQ9WTU3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn8aQ9WTU3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Scn8aQ9WTU3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.18■□□□□ 0.98
Scn8aQ9WTU3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Scn8aQ9WTU3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Scn8aQ9WTU3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn8aQ9WTU3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Scn8aQ9WTU3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn8aQ9WTU3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Scn8aQ9WTU3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Scn8aQ9WTU3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn8aQ9WTU3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.17■□□□□ 0.98
Scn8aQ9WTU3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn8aQ9WTU3 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.17■□□□□ 0.98
Scn8aQ9WTU3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn8aQ9WTU3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Scn8aQ9WTU3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn8aQ9WTU3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Scn8aQ9WTU3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Scn8aQ9WTU3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn8aQ9WTU3 Gm13241-201ENSMUST00000094493 780 ntBASIC21.16■□□□□ 0.98
Scn8aQ9WTU3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
Scn8aQ9WTU3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Scn8aQ9WTU3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn8aQ9WTU3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.15■□□□□ 0.98
Scn8aQ9WTU3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.15■□□□□ 0.98
Scn8aQ9WTU3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Scn8aQ9WTU3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Scn8aQ9WTU3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Scn8aQ9WTU3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Scn8aQ9WTU3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
Scn8aQ9WTU3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scn8aQ9WTU3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Scn8aQ9WTU3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scn8aQ9WTU3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Scn8aQ9WTU3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.14■□□□□ 0.97
Scn8aQ9WTU3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn8aQ9WTU3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.13■□□□□ 0.97
Scn8aQ9WTU3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn8aQ9WTU3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn8aQ9WTU3 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.13■□□□□ 0.97
Scn8aQ9WTU3 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.12■□□□□ 0.97
Scn8aQ9WTU3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.12■□□□□ 0.97
Scn8aQ9WTU3 Gm7143-201ENSMUST00000222811 859 ntBASIC21.12■□□□□ 0.97
Scn8aQ9WTU3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Scn8aQ9WTU3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn8aQ9WTU3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn8aQ9WTU3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Scn8aQ9WTU3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Scn8aQ9WTU3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Scn8aQ9WTU3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn8aQ9WTU3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Scn8aQ9WTU3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn8aQ9WTU3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn8aQ9WTU3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn8aQ9WTU3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
Scn8aQ9WTU3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn8aQ9WTU3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn8aQ9WTU3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn8aQ9WTU3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn8aQ9WTU3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Scn8aQ9WTU3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn8aQ9WTU3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms