Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clcn2Q9R0A1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Clcn2Q9R0A1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn2Q9R0A1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn2Q9R0A1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Clcn2Q9R0A1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn2Q9R0A1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Clcn2Q9R0A1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn2Q9R0A1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
Clcn2Q9R0A1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn2Q9R0A1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Clcn2Q9R0A1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn2Q9R0A1 Gm5812-201ENSMUST00000061073 957 ntBASIC21.17■□□□□ 0.98
Clcn2Q9R0A1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Clcn2Q9R0A1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn2Q9R0A1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clcn2Q9R0A1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn2Q9R0A1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn2Q9R0A1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Clcn2Q9R0A1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn2Q9R0A1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn2Q9R0A1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn2Q9R0A1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Clcn2Q9R0A1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn2Q9R0A1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clcn2Q9R0A1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn2Q9R0A1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn2Q9R0A1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn2Q9R0A1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.15■□□□□ 0.98
Clcn2Q9R0A1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clcn2Q9R0A1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Clcn2Q9R0A1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.14■□□□□ 0.97
Clcn2Q9R0A1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn2Q9R0A1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Clcn2Q9R0A1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clcn2Q9R0A1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.13■□□□□ 0.97
Clcn2Q9R0A1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn2Q9R0A1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn2Q9R0A1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn2Q9R0A1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn2Q9R0A1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn2Q9R0A1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.13■□□□□ 0.97
Clcn2Q9R0A1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Clcn2Q9R0A1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.13■□□□□ 0.97
Clcn2Q9R0A1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn2Q9R0A1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn2Q9R0A1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn2Q9R0A1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn2Q9R0A1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clcn2Q9R0A1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn2Q9R0A1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn2Q9R0A1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn2Q9R0A1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn2Q9R0A1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clcn2Q9R0A1 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.12■□□□□ 0.97
Clcn2Q9R0A1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Clcn2Q9R0A1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn2Q9R0A1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn2Q9R0A1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn2Q9R0A1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.11■□□□□ 0.97
Clcn2Q9R0A1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Clcn2Q9R0A1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn2Q9R0A1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn2Q9R0A1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clcn2Q9R0A1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.1■□□□□ 0.97
Clcn2Q9R0A1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn2Q9R0A1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn2Q9R0A1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn2Q9R0A1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn2Q9R0A1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn2Q9R0A1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Clcn2Q9R0A1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clcn2Q9R0A1 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.1■□□□□ 0.97
Clcn2Q9R0A1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clcn2Q9R0A1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.09■□□□□ 0.97
Clcn2Q9R0A1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.09■□□□□ 0.97
Clcn2Q9R0A1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.09■□□□□ 0.97
Clcn2Q9R0A1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Clcn2Q9R0A1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Clcn2Q9R0A1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Clcn2Q9R0A1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clcn2Q9R0A1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clcn2Q9R0A1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clcn2Q9R0A1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clcn2Q9R0A1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clcn2Q9R0A1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clcn2Q9R0A1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn2Q9R0A1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn2Q9R0A1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn2Q9R0A1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn2Q9R0A1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn2Q9R0A1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn2Q9R0A1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn2Q9R0A1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn2Q9R0A1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clcn2Q9R0A1 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.06■□□□□ 0.96
Clcn2Q9R0A1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn2Q9R0A1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn2Q9R0A1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Clcn2Q9R0A1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms