Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcf1Q9QZM3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcf1Q9QZM3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcf1Q9QZM3 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.79■□□□□ 0.6
Clcf1Q9QZM3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcf1Q9QZM3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcf1Q9QZM3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcf1Q9QZM3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcf1Q9QZM3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcf1Q9QZM3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcf1Q9QZM3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clcf1Q9QZM3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.78■□□□□ 0.6
Clcf1Q9QZM3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcf1Q9QZM3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcf1Q9QZM3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcf1Q9QZM3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcf1Q9QZM3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcf1Q9QZM3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Clcf1Q9QZM3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.77■□□□□ 0.6
Clcf1Q9QZM3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clcf1Q9QZM3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.77■□□□□ 0.6
Clcf1Q9QZM3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcf1Q9QZM3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clcf1Q9QZM3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.76■□□□□ 0.59
Clcf1Q9QZM3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.76■□□□□ 0.59
Clcf1Q9QZM3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Clcf1Q9QZM3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clcf1Q9QZM3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.76■□□□□ 0.59
Clcf1Q9QZM3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.76■□□□□ 0.59
Clcf1Q9QZM3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Clcf1Q9QZM3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Clcf1Q9QZM3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clcf1Q9QZM3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Clcf1Q9QZM3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Clcf1Q9QZM3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clcf1Q9QZM3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.75■□□□□ 0.59
Clcf1Q9QZM3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Clcf1Q9QZM3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Clcf1Q9QZM3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Clcf1Q9QZM3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clcf1Q9QZM3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Clcf1Q9QZM3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clcf1Q9QZM3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clcf1Q9QZM3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.74■□□□□ 0.59
Clcf1Q9QZM3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Clcf1Q9QZM3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Clcf1Q9QZM3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.74■□□□□ 0.59
Clcf1Q9QZM3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.74■□□□□ 0.59
Clcf1Q9QZM3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clcf1Q9QZM3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clcf1Q9QZM3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Clcf1Q9QZM3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Clcf1Q9QZM3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.74■□□□□ 0.59
Clcf1Q9QZM3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Clcf1Q9QZM3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clcf1Q9QZM3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clcf1Q9QZM3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Clcf1Q9QZM3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Clcf1Q9QZM3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clcf1Q9QZM3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clcf1Q9QZM3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clcf1Q9QZM3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clcf1Q9QZM3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Clcf1Q9QZM3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcf1Q9QZM3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcf1Q9QZM3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Clcf1Q9QZM3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Clcf1Q9QZM3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.72■□□□□ 0.59
Clcf1Q9QZM3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcf1Q9QZM3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcf1Q9QZM3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcf1Q9QZM3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcf1Q9QZM3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcf1Q9QZM3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Clcf1Q9QZM3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.71■□□□□ 0.59
Clcf1Q9QZM3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clcf1Q9QZM3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clcf1Q9QZM3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.71■□□□□ 0.59
Clcf1Q9QZM3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clcf1Q9QZM3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clcf1Q9QZM3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.7■□□□□ 0.58
Clcf1Q9QZM3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.7■□□□□ 0.58
Clcf1Q9QZM3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Clcf1Q9QZM3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Clcf1Q9QZM3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcf1Q9QZM3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcf1Q9QZM3 Gm22238-201ENSMUST00000175222 88 ntBASIC18.69■□□□□ 0.58
Clcf1Q9QZM3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcf1Q9QZM3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Clcf1Q9QZM3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Clcf1Q9QZM3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcf1Q9QZM3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcf1Q9QZM3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcf1Q9QZM3 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.69■□□□□ 0.58
Clcf1Q9QZM3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Clcf1Q9QZM3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Clcf1Q9QZM3 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.68■□□□□ 0.58
Clcf1Q9QZM3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcf1Q9QZM3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcf1Q9QZM3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms