Protein–RNA interactions for Protein: Q9JIG8

Praf2, PRA1 family protein 2, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Praf2Q9JIG8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Praf2Q9JIG8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Praf2Q9JIG8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Praf2Q9JIG8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Praf2Q9JIG8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.43■□□□□ 0.54
Praf2Q9JIG8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Praf2Q9JIG8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Praf2Q9JIG8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Praf2Q9JIG8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Praf2Q9JIG8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Praf2Q9JIG8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Praf2Q9JIG8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Praf2Q9JIG8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Praf2Q9JIG8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Praf2Q9JIG8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Praf2Q9JIG8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Praf2Q9JIG8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Praf2Q9JIG8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Praf2Q9JIG8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Praf2Q9JIG8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Praf2Q9JIG8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Praf2Q9JIG8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Praf2Q9JIG8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Praf2Q9JIG8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.41■□□□□ 0.54
Praf2Q9JIG8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Praf2Q9JIG8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Praf2Q9JIG8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Praf2Q9JIG8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Praf2Q9JIG8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Praf2Q9JIG8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.4■□□□□ 0.54
Praf2Q9JIG8 Mir3960-201ENSMUST00000198213 73 ntBASIC18.4■□□□□ 0.54
Praf2Q9JIG8 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.4■□□□□ 0.54
Praf2Q9JIG8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Praf2Q9JIG8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Praf2Q9JIG8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.4■□□□□ 0.54
Praf2Q9JIG8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Praf2Q9JIG8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Praf2Q9JIG8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Praf2Q9JIG8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Praf2Q9JIG8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Praf2Q9JIG8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Praf2Q9JIG8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Praf2Q9JIG8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Praf2Q9JIG8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Praf2Q9JIG8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Praf2Q9JIG8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Praf2Q9JIG8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Praf2Q9JIG8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Praf2Q9JIG8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Praf2Q9JIG8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Praf2Q9JIG8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Praf2Q9JIG8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Praf2Q9JIG8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Praf2Q9JIG8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Praf2Q9JIG8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.38■□□□□ 0.53
Praf2Q9JIG8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Praf2Q9JIG8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Praf2Q9JIG8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Praf2Q9JIG8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Praf2Q9JIG8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Praf2Q9JIG8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Praf2Q9JIG8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Praf2Q9JIG8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Praf2Q9JIG8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.37■□□□□ 0.53
Praf2Q9JIG8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Praf2Q9JIG8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Praf2Q9JIG8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Praf2Q9JIG8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Praf2Q9JIG8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Praf2Q9JIG8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.37■□□□□ 0.53
Praf2Q9JIG8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Praf2Q9JIG8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Praf2Q9JIG8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Praf2Q9JIG8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Praf2Q9JIG8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Praf2Q9JIG8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.36■□□□□ 0.53
Praf2Q9JIG8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Praf2Q9JIG8 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.36■□□□□ 0.53
Praf2Q9JIG8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Praf2Q9JIG8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Praf2Q9JIG8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Praf2Q9JIG8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Praf2Q9JIG8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Praf2Q9JIG8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Praf2Q9JIG8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Praf2Q9JIG8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Praf2Q9JIG8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Praf2Q9JIG8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.34■□□□□ 0.53
Praf2Q9JIG8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Praf2Q9JIG8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Praf2Q9JIG8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Praf2Q9JIG8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Praf2Q9JIG8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Praf2Q9JIG8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Praf2Q9JIG8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Praf2Q9JIG8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Praf2Q9JIG8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Praf2Q9JIG8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Praf2Q9JIG8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Praf2Q9JIG8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms