Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chmp2aQ9DB34 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chmp2aQ9DB34 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Chmp2aQ9DB34 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chmp2aQ9DB34 Gm14117-201ENSMUST00000122417 843 ntBASIC21.65■■□□□ 1.06
Chmp2aQ9DB34 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.65■■□□□ 1.06
Chmp2aQ9DB34 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.65■■□□□ 1.06
Chmp2aQ9DB34 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chmp2aQ9DB34 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Chmp2aQ9DB34 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.65■■□□□ 1.06
Chmp2aQ9DB34 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Chmp2aQ9DB34 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Chmp2aQ9DB34 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Chmp2aQ9DB34 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Chmp2aQ9DB34 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Chmp2aQ9DB34 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chmp2aQ9DB34 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.64■■□□□ 1.05
Chmp2aQ9DB34 Gm10399-202ENSMUST00000202768 748 ntBASIC21.64■■□□□ 1.05
Chmp2aQ9DB34 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chmp2aQ9DB34 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Chmp2aQ9DB34 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chmp2aQ9DB34 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Chmp2aQ9DB34 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.63■■□□□ 1.05
Chmp2aQ9DB34 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chmp2aQ9DB34 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Chmp2aQ9DB34 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Chmp2aQ9DB34 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.62■■□□□ 1.05
Chmp2aQ9DB34 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Chmp2aQ9DB34 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chmp2aQ9DB34 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Chmp2aQ9DB34 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Chmp2aQ9DB34 Gm40881-201ENSMUST00000223397 166 ntBASIC21.62■■□□□ 1.05
Chmp2aQ9DB34 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Chmp2aQ9DB34 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chmp2aQ9DB34 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp2aQ9DB34 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp2aQ9DB34 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp2aQ9DB34 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp2aQ9DB34 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp2aQ9DB34 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Chmp2aQ9DB34 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.61■■□□□ 1.05
Chmp2aQ9DB34 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chmp2aQ9DB34 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.6■■□□□ 1.05
Chmp2aQ9DB34 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.6■■□□□ 1.05
Chmp2aQ9DB34 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.6■■□□□ 1.05
Chmp2aQ9DB34 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.6■■□□□ 1.05
Chmp2aQ9DB34 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.6■■□□□ 1.05
Chmp2aQ9DB34 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chmp2aQ9DB34 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chmp2aQ9DB34 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Chmp2aQ9DB34 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp2aQ9DB34 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp2aQ9DB34 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp2aQ9DB34 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp2aQ9DB34 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Chmp2aQ9DB34 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Chmp2aQ9DB34 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp2aQ9DB34 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.59■■□□□ 1.05
Chmp2aQ9DB34 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp2aQ9DB34 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chmp2aQ9DB34 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chmp2aQ9DB34 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chmp2aQ9DB34 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chmp2aQ9DB34 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Chmp2aQ9DB34 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp2aQ9DB34 Gm7417-201ENSMUST00000192950 473 ntBASIC21.57■■□□□ 1.04
Chmp2aQ9DB34 Gm45102-201ENSMUST00000207427 857 ntBASIC21.57■■□□□ 1.04
Chmp2aQ9DB34 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp2aQ9DB34 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp2aQ9DB34 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Chmp2aQ9DB34 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp2aQ9DB34 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.57■■□□□ 1.04
Chmp2aQ9DB34 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp2aQ9DB34 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chmp2aQ9DB34 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.56■■□□□ 1.04
Chmp2aQ9DB34 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp2aQ9DB34 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chmp2aQ9DB34 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Chmp2aQ9DB34 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.56■■□□□ 1.04
Chmp2aQ9DB34 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp2aQ9DB34 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp2aQ9DB34 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp2aQ9DB34 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp2aQ9DB34 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp2aQ9DB34 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp2aQ9DB34 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp2aQ9DB34 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chmp2aQ9DB34 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Chmp2aQ9DB34 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.54■■□□□ 1.04
Chmp2aQ9DB34 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Chmp2aQ9DB34 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chmp2aQ9DB34 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chmp2aQ9DB34 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chmp2aQ9DB34 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.53■■□□□ 1.04
Chmp2aQ9DB34 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chmp2aQ9DB34 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Chmp2aQ9DB34 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chmp2aQ9DB34 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Chmp2aQ9DB34 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chmp2aQ9DB34 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms