Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.59■□□□□ 0.57
Rtl8cQ9D6I0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl8cQ9D6I0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl8cQ9D6I0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl8cQ9D6I0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Rtl8cQ9D6I0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl8cQ9D6I0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rtl8cQ9D6I0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl8cQ9D6I0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Rtl8cQ9D6I0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl8cQ9D6I0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl8cQ9D6I0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Rtl8cQ9D6I0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rtl8cQ9D6I0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rtl8cQ9D6I0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.58■□□□□ 0.56
Rtl8cQ9D6I0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rtl8cQ9D6I0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtl8cQ9D6I0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtl8cQ9D6I0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtl8cQ9D6I0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtl8cQ9D6I0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rtl8cQ9D6I0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Rtl8cQ9D6I0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.57■□□□□ 0.56
Rtl8cQ9D6I0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtl8cQ9D6I0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtl8cQ9D6I0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rtl8cQ9D6I0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtl8cQ9D6I0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtl8cQ9D6I0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rtl8cQ9D6I0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rtl8cQ9D6I0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtl8cQ9D6I0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rtl8cQ9D6I0 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.56■□□□□ 0.56
Rtl8cQ9D6I0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtl8cQ9D6I0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtl8cQ9D6I0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtl8cQ9D6I0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtl8cQ9D6I0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtl8cQ9D6I0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Rtl8cQ9D6I0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rtl8cQ9D6I0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtl8cQ9D6I0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtl8cQ9D6I0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtl8cQ9D6I0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.55■□□□□ 0.56
Rtl8cQ9D6I0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.55■□□□□ 0.56
Rtl8cQ9D6I0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rtl8cQ9D6I0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtl8cQ9D6I0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.55■□□□□ 0.56
Rtl8cQ9D6I0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtl8cQ9D6I0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtl8cQ9D6I0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rtl8cQ9D6I0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Rtl8cQ9D6I0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Rtl8cQ9D6I0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rtl8cQ9D6I0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.54■□□□□ 0.56
Rtl8cQ9D6I0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rtl8cQ9D6I0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtl8cQ9D6I0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtl8cQ9D6I0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtl8cQ9D6I0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rtl8cQ9D6I0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtl8cQ9D6I0 Gm10399-202ENSMUST00000202768 748 ntBASIC18.53■□□□□ 0.56
Rtl8cQ9D6I0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtl8cQ9D6I0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtl8cQ9D6I0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.53■□□□□ 0.56
Rtl8cQ9D6I0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtl8cQ9D6I0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtl8cQ9D6I0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rtl8cQ9D6I0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtl8cQ9D6I0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtl8cQ9D6I0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.52■□□□□ 0.56
Rtl8cQ9D6I0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtl8cQ9D6I0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rtl8cQ9D6I0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtl8cQ9D6I0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtl8cQ9D6I0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rtl8cQ9D6I0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.52■□□□□ 0.56
Rtl8cQ9D6I0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtl8cQ9D6I0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.52■□□□□ 0.56
Rtl8cQ9D6I0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rtl8cQ9D6I0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rtl8cQ9D6I0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rtl8cQ9D6I0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtl8cQ9D6I0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtl8cQ9D6I0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtl8cQ9D6I0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtl8cQ9D6I0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtl8cQ9D6I0 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.51■□□□□ 0.55
Rtl8cQ9D6I0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rtl8cQ9D6I0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtl8cQ9D6I0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.5■□□□□ 0.55
Rtl8cQ9D6I0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rtl8cQ9D6I0 Gm10232-201ENSMUST00000089221 720 ntBASIC18.5■□□□□ 0.55
Rtl8cQ9D6I0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtl8cQ9D6I0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtl8cQ9D6I0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtl8cQ9D6I0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtl8cQ9D6I0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtl8cQ9D6I0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Rtl8cQ9D6I0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms