Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim42Q9D2H5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim42Q9D2H5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Trim42Q9D2H5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.62■□□□□ 0.89
Trim42Q9D2H5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim42Q9D2H5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim42Q9D2H5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim42Q9D2H5 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim42Q9D2H5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim42Q9D2H5 Gm11599-201ENSMUST00000118720 878 ntBASIC20.61■□□□□ 0.89
Trim42Q9D2H5 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim42Q9D2H5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim42Q9D2H5 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.61■□□□□ 0.89
Trim42Q9D2H5 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.61■□□□□ 0.89
Trim42Q9D2H5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Trim42Q9D2H5 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim42Q9D2H5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Trim42Q9D2H5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.6■□□□□ 0.89
Trim42Q9D2H5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim42Q9D2H5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim42Q9D2H5 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.6■□□□□ 0.89
Trim42Q9D2H5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.6■□□□□ 0.89
Trim42Q9D2H5 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim42Q9D2H5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.59■□□□□ 0.89
Trim42Q9D2H5 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim42Q9D2H5 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Trim42Q9D2H5 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim42Q9D2H5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim42Q9D2H5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim42Q9D2H5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Trim42Q9D2H5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim42Q9D2H5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.58■□□□□ 0.89
Trim42Q9D2H5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim42Q9D2H5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim42Q9D2H5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trim42Q9D2H5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim42Q9D2H5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim42Q9D2H5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim42Q9D2H5 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.57■□□□□ 0.88
Trim42Q9D2H5 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Trim42Q9D2H5 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim42Q9D2H5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trim42Q9D2H5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Trim42Q9D2H5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.56■□□□□ 0.88
Trim42Q9D2H5 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim42Q9D2H5 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim42Q9D2H5 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim42Q9D2H5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim42Q9D2H5 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim42Q9D2H5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim42Q9D2H5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim42Q9D2H5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Trim42Q9D2H5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim42Q9D2H5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim42Q9D2H5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim42Q9D2H5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim42Q9D2H5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim42Q9D2H5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim42Q9D2H5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim42Q9D2H5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim42Q9D2H5 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim42Q9D2H5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim42Q9D2H5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim42Q9D2H5 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.54■□□□□ 0.88
Trim42Q9D2H5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim42Q9D2H5 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim42Q9D2H5 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim42Q9D2H5 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim42Q9D2H5 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim42Q9D2H5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim42Q9D2H5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim42Q9D2H5 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.53■□□□□ 0.88
Trim42Q9D2H5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim42Q9D2H5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim42Q9D2H5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim42Q9D2H5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trim42Q9D2H5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim42Q9D2H5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim42Q9D2H5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim42Q9D2H5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim42Q9D2H5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim42Q9D2H5 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim42Q9D2H5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Trim42Q9D2H5 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim42Q9D2H5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.52■□□□□ 0.87
Trim42Q9D2H5 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim42Q9D2H5 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Trim42Q9D2H5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.51■□□□□ 0.87
Trim42Q9D2H5 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.51■□□□□ 0.87
Trim42Q9D2H5 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim42Q9D2H5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim42Q9D2H5 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Trim42Q9D2H5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim42Q9D2H5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.51■□□□□ 0.87
Trim42Q9D2H5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim42Q9D2H5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim42Q9D2H5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim42Q9D2H5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim42Q9D2H5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim42Q9D2H5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms