Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rita1Q9D1H0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rita1Q9D1H0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rita1Q9D1H0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rita1Q9D1H0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rita1Q9D1H0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rita1Q9D1H0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.24■□□□□ 0.67
Rita1Q9D1H0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rita1Q9D1H0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.24■□□□□ 0.67
Rita1Q9D1H0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rita1Q9D1H0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Rita1Q9D1H0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rita1Q9D1H0 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.24■□□□□ 0.67
Rita1Q9D1H0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rita1Q9D1H0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.23■□□□□ 0.67
Rita1Q9D1H0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rita1Q9D1H0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rita1Q9D1H0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Rita1Q9D1H0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rita1Q9D1H0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rita1Q9D1H0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rita1Q9D1H0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rita1Q9D1H0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rita1Q9D1H0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rita1Q9D1H0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rita1Q9D1H0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rita1Q9D1H0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
Rita1Q9D1H0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rita1Q9D1H0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rita1Q9D1H0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rita1Q9D1H0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rita1Q9D1H0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rita1Q9D1H0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
Rita1Q9D1H0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.21■□□□□ 0.67
Rita1Q9D1H0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rita1Q9D1H0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rita1Q9D1H0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rita1Q9D1H0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rita1Q9D1H0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rita1Q9D1H0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rita1Q9D1H0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
Rita1Q9D1H0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rita1Q9D1H0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rita1Q9D1H0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rita1Q9D1H0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rita1Q9D1H0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rita1Q9D1H0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rita1Q9D1H0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rita1Q9D1H0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rita1Q9D1H0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rita1Q9D1H0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.19■□□□□ 0.66
Rita1Q9D1H0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rita1Q9D1H0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rita1Q9D1H0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rita1Q9D1H0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.18■□□□□ 0.66
Rita1Q9D1H0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rita1Q9D1H0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Rita1Q9D1H0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rita1Q9D1H0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
Rita1Q9D1H0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rita1Q9D1H0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rita1Q9D1H0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Rita1Q9D1H0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Rita1Q9D1H0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.17■□□□□ 0.66
Rita1Q9D1H0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rita1Q9D1H0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rita1Q9D1H0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rita1Q9D1H0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rita1Q9D1H0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rita1Q9D1H0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rita1Q9D1H0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.16■□□□□ 0.66
Rita1Q9D1H0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.16■□□□□ 0.66
Rita1Q9D1H0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.16■□□□□ 0.66
Rita1Q9D1H0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rita1Q9D1H0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rita1Q9D1H0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rita1Q9D1H0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.15■□□□□ 0.66
Rita1Q9D1H0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rita1Q9D1H0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.15■□□□□ 0.66
Rita1Q9D1H0 Gm21956-201ENSMUST00000179946 522 ntBASIC19.15■□□□□ 0.66
Rita1Q9D1H0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Rita1Q9D1H0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rita1Q9D1H0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.14■□□□□ 0.65
Rita1Q9D1H0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.14■□□□□ 0.65
Rita1Q9D1H0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rita1Q9D1H0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.14■□□□□ 0.65
Rita1Q9D1H0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rita1Q9D1H0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rita1Q9D1H0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rita1Q9D1H0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rita1Q9D1H0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.13■□□□□ 0.65
Rita1Q9D1H0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rita1Q9D1H0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.13■□□□□ 0.65
Rita1Q9D1H0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rita1Q9D1H0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
Rita1Q9D1H0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rita1Q9D1H0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rita1Q9D1H0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rita1Q9D1H0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rita1Q9D1H0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms