Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chaf1bQ9D0N7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chaf1bQ9D0N7 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.45■□□□□ 0.7
Chaf1bQ9D0N7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Chaf1bQ9D0N7 Gm16437-201ENSMUST00000025669 507 ntBASIC19.45■□□□□ 0.7
Chaf1bQ9D0N7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chaf1bQ9D0N7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chaf1bQ9D0N7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chaf1bQ9D0N7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Chaf1bQ9D0N7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Chaf1bQ9D0N7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chaf1bQ9D0N7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chaf1bQ9D0N7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Chaf1bQ9D0N7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Chaf1bQ9D0N7 Scarna2-201ENSMUST00000157560 414 ntBASIC19.44■□□□□ 0.7
Chaf1bQ9D0N7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Chaf1bQ9D0N7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Chaf1bQ9D0N7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Chaf1bQ9D0N7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.44■□□□□ 0.7
Chaf1bQ9D0N7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chaf1bQ9D0N7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Chaf1bQ9D0N7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chaf1bQ9D0N7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chaf1bQ9D0N7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chaf1bQ9D0N7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Chaf1bQ9D0N7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chaf1bQ9D0N7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chaf1bQ9D0N7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chaf1bQ9D0N7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chaf1bQ9D0N7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Chaf1bQ9D0N7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chaf1bQ9D0N7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Chaf1bQ9D0N7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chaf1bQ9D0N7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.42■□□□□ 0.7
Chaf1bQ9D0N7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chaf1bQ9D0N7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chaf1bQ9D0N7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chaf1bQ9D0N7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.42■□□□□ 0.7
Chaf1bQ9D0N7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.42■□□□□ 0.7
Chaf1bQ9D0N7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Chaf1bQ9D0N7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chaf1bQ9D0N7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chaf1bQ9D0N7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.41■□□□□ 0.7
Chaf1bQ9D0N7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chaf1bQ9D0N7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Chaf1bQ9D0N7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chaf1bQ9D0N7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chaf1bQ9D0N7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chaf1bQ9D0N7 Gm9806-201ENSMUST00000051080 552 ntBASIC19.4■□□□□ 0.7
Chaf1bQ9D0N7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chaf1bQ9D0N7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chaf1bQ9D0N7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chaf1bQ9D0N7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chaf1bQ9D0N7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.39■□□□□ 0.69
Chaf1bQ9D0N7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.39■□□□□ 0.69
Chaf1bQ9D0N7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.39■□□□□ 0.69
Chaf1bQ9D0N7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chaf1bQ9D0N7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Chaf1bQ9D0N7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chaf1bQ9D0N7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Chaf1bQ9D0N7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chaf1bQ9D0N7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chaf1bQ9D0N7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chaf1bQ9D0N7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chaf1bQ9D0N7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chaf1bQ9D0N7 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.38■□□□□ 0.69
Chaf1bQ9D0N7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chaf1bQ9D0N7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chaf1bQ9D0N7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chaf1bQ9D0N7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chaf1bQ9D0N7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chaf1bQ9D0N7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chaf1bQ9D0N7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chaf1bQ9D0N7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chaf1bQ9D0N7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1bQ9D0N7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1bQ9D0N7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1bQ9D0N7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Chaf1bQ9D0N7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1bQ9D0N7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Chaf1bQ9D0N7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1bQ9D0N7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chaf1bQ9D0N7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chaf1bQ9D0N7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chaf1bQ9D0N7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chaf1bQ9D0N7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chaf1bQ9D0N7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Chaf1bQ9D0N7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chaf1bQ9D0N7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chaf1bQ9D0N7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chaf1bQ9D0N7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chaf1bQ9D0N7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chaf1bQ9D0N7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Chaf1bQ9D0N7 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.35■□□□□ 0.69
Chaf1bQ9D0N7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chaf1bQ9D0N7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chaf1bQ9D0N7 Iqck-206ENSMUST00000208658 2891 ntBASIC19.35■□□□□ 0.69
Chaf1bQ9D0N7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chaf1bQ9D0N7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chaf1bQ9D0N7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms