Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn1Q9CWM4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn1Q9CWM4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn1Q9CWM4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn1Q9CWM4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn1Q9CWM4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.23■□□□□ 0.51
Pfdn1Q9CWM4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn1Q9CWM4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn1Q9CWM4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pfdn1Q9CWM4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pfdn1Q9CWM4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pfdn1Q9CWM4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pfdn1Q9CWM4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.22■□□□□ 0.51
Pfdn1Q9CWM4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pfdn1Q9CWM4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Pfdn1Q9CWM4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pfdn1Q9CWM4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pfdn1Q9CWM4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pfdn1Q9CWM4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pfdn1Q9CWM4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pfdn1Q9CWM4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pfdn1Q9CWM4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pfdn1Q9CWM4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pfdn1Q9CWM4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pfdn1Q9CWM4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pfdn1Q9CWM4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn1Q9CWM4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn1Q9CWM4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn1Q9CWM4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.2■□□□□ 0.5
Pfdn1Q9CWM4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn1Q9CWM4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn1Q9CWM4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pfdn1Q9CWM4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn1Q9CWM4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn1Q9CWM4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pfdn1Q9CWM4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pfdn1Q9CWM4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.19■□□□□ 0.5
Pfdn1Q9CWM4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pfdn1Q9CWM4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pfdn1Q9CWM4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pfdn1Q9CWM4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pfdn1Q9CWM4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Pfdn1Q9CWM4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pfdn1Q9CWM4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pfdn1Q9CWM4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pfdn1Q9CWM4 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pfdn1Q9CWM4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pfdn1Q9CWM4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pfdn1Q9CWM4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pfdn1Q9CWM4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pfdn1Q9CWM4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pfdn1Q9CWM4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pfdn1Q9CWM4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pfdn1Q9CWM4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pfdn1Q9CWM4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pfdn1Q9CWM4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pfdn1Q9CWM4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pfdn1Q9CWM4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pfdn1Q9CWM4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pfdn1Q9CWM4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pfdn1Q9CWM4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pfdn1Q9CWM4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pfdn1Q9CWM4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pfdn1Q9CWM4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pfdn1Q9CWM4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pfdn1Q9CWM4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pfdn1Q9CWM4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pfdn1Q9CWM4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.15■□□□□ 0.5
Pfdn1Q9CWM4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pfdn1Q9CWM4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pfdn1Q9CWM4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pfdn1Q9CWM4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pfdn1Q9CWM4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pfdn1Q9CWM4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pfdn1Q9CWM4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pfdn1Q9CWM4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pfdn1Q9CWM4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pfdn1Q9CWM4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pfdn1Q9CWM4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pfdn1Q9CWM4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pfdn1Q9CWM4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pfdn1Q9CWM4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pfdn1Q9CWM4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Pfdn1Q9CWM4 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.14■□□□□ 0.5
Pfdn1Q9CWM4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pfdn1Q9CWM4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pfdn1Q9CWM4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pfdn1Q9CWM4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pfdn1Q9CWM4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pfdn1Q9CWM4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pfdn1Q9CWM4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pfdn1Q9CWM4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pfdn1Q9CWM4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pfdn1Q9CWM4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.14■□□□□ 0.49
Pfdn1Q9CWM4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pfdn1Q9CWM4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pfdn1Q9CWM4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pfdn1Q9CWM4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Pfdn1Q9CWM4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pfdn1Q9CWM4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms