Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smurf1Q9CUN6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smurf1Q9CUN6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smurf1Q9CUN6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Smurf1Q9CUN6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smurf1Q9CUN6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smurf1Q9CUN6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smurf1Q9CUN6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smurf1Q9CUN6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Smurf1Q9CUN6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Smurf1Q9CUN6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smurf1Q9CUN6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smurf1Q9CUN6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smurf1Q9CUN6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Smurf1Q9CUN6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smurf1Q9CUN6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smurf1Q9CUN6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smurf1Q9CUN6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smurf1Q9CUN6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Smurf1Q9CUN6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.77■□□□□ 0.6
Smurf1Q9CUN6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.77■□□□□ 0.6
Smurf1Q9CUN6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smurf1Q9CUN6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smurf1Q9CUN6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smurf1Q9CUN6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smurf1Q9CUN6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Smurf1Q9CUN6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smurf1Q9CUN6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.76■□□□□ 0.59
Smurf1Q9CUN6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Smurf1Q9CUN6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smurf1Q9CUN6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smurf1Q9CUN6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.76■□□□□ 0.59
Smurf1Q9CUN6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smurf1Q9CUN6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smurf1Q9CUN6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smurf1Q9CUN6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smurf1Q9CUN6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smurf1Q9CUN6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.75■□□□□ 0.59
Smurf1Q9CUN6 Mir6538-201ENSMUST00000183713 110 ntBASIC18.75■□□□□ 0.59
Smurf1Q9CUN6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smurf1Q9CUN6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smurf1Q9CUN6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Smurf1Q9CUN6 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smurf1Q9CUN6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Smurf1Q9CUN6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smurf1Q9CUN6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smurf1Q9CUN6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smurf1Q9CUN6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smurf1Q9CUN6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smurf1Q9CUN6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
Smurf1Q9CUN6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Smurf1Q9CUN6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Smurf1Q9CUN6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smurf1Q9CUN6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smurf1Q9CUN6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.73■□□□□ 0.59
Smurf1Q9CUN6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Smurf1Q9CUN6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Smurf1Q9CUN6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.73■□□□□ 0.59
Smurf1Q9CUN6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smurf1Q9CUN6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smurf1Q9CUN6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smurf1Q9CUN6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smurf1Q9CUN6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smurf1Q9CUN6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smurf1Q9CUN6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smurf1Q9CUN6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smurf1Q9CUN6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smurf1Q9CUN6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smurf1Q9CUN6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Smurf1Q9CUN6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.72■□□□□ 0.59
Smurf1Q9CUN6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smurf1Q9CUN6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smurf1Q9CUN6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smurf1Q9CUN6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smurf1Q9CUN6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smurf1Q9CUN6 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smurf1Q9CUN6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smurf1Q9CUN6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.71■□□□□ 0.59
Smurf1Q9CUN6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.71■□□□□ 0.59
Smurf1Q9CUN6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smurf1Q9CUN6 Gm11687-201ENSMUST00000118911 886 ntBASIC18.71■□□□□ 0.59
Smurf1Q9CUN6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.71■□□□□ 0.59
Smurf1Q9CUN6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smurf1Q9CUN6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Smurf1Q9CUN6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Smurf1Q9CUN6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smurf1Q9CUN6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Smurf1Q9CUN6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Smurf1Q9CUN6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.7■□□□□ 0.58
Smurf1Q9CUN6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smurf1Q9CUN6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Smurf1Q9CUN6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smurf1Q9CUN6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Smurf1Q9CUN6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Smurf1Q9CUN6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smurf1Q9CUN6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smurf1Q9CUN6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smurf1Q9CUN6 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.69■□□□□ 0.58
Smurf1Q9CUN6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smurf1Q9CUN6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms