Protein–RNA interactions for Protein: Q9CR26

Vta1, Vacuolar protein sorting-associated protein VTA1 homolog, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vta1Q9CR26 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Vta1Q9CR26 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Vta1Q9CR26 Gm43759-201ENSMUST00000196925 1261 ntBASIC23.74■■□□□ 1.39
Vta1Q9CR26 Gm21168-201ENSMUST00000199646 1096 ntBASIC23.74■■□□□ 1.39
Vta1Q9CR26 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Vta1Q9CR26 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Vta1Q9CR26 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Vta1Q9CR26 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Vta1Q9CR26 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Vta1Q9CR26 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Vta1Q9CR26 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Vta1Q9CR26 Gm18284-201ENSMUST00000172604 624 ntBASIC23.73■■□□□ 1.39
Vta1Q9CR26 Flvcr1-202ENSMUST00000191946 1216 ntBASIC23.73■■□□□ 1.39
Vta1Q9CR26 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC23.73■■□□□ 1.39
Vta1Q9CR26 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Vta1Q9CR26 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Vta1Q9CR26 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC23.72■■□□□ 1.39
Vta1Q9CR26 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Vta1Q9CR26 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC23.72■■□□□ 1.39
Vta1Q9CR26 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Vta1Q9CR26 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Vta1Q9CR26 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.72■■□□□ 1.39
Vta1Q9CR26 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vta1Q9CR26 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vta1Q9CR26 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vta1Q9CR26 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Vta1Q9CR26 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.71■■□□□ 1.39
Vta1Q9CR26 Gm43017-201ENSMUST00000198296 752 ntBASIC23.71■■□□□ 1.39
Vta1Q9CR26 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vta1Q9CR26 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vta1Q9CR26 Gm5576-201ENSMUST00000075809 1236 ntBASIC23.71■■□□□ 1.39
Vta1Q9CR26 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vta1Q9CR26 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vta1Q9CR26 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Vta1Q9CR26 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC23.7■■□□□ 1.38
Vta1Q9CR26 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Vta1Q9CR26 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
Vta1Q9CR26 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Vta1Q9CR26 Gm8493-201ENSMUST00000196881 489 ntBASIC23.7■■□□□ 1.38
Vta1Q9CR26 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Vta1Q9CR26 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Vta1Q9CR26 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Vta1Q9CR26 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Vta1Q9CR26 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Vta1Q9CR26 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Vta1Q9CR26 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC23.69■■□□□ 1.38
Vta1Q9CR26 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Vta1Q9CR26 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Vta1Q9CR26 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Vta1Q9CR26 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.69■■□□□ 1.38
Vta1Q9CR26 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Vta1Q9CR26 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Vta1Q9CR26 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC23.68■■□□□ 1.38
Vta1Q9CR26 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Vta1Q9CR26 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC23.68■■□□□ 1.38
Vta1Q9CR26 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Vta1Q9CR26 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC23.67■■□□□ 1.38
Vta1Q9CR26 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Vta1Q9CR26 Wdr70-203ENSMUST00000227371 1130 ntBASIC23.67■■□□□ 1.38
Vta1Q9CR26 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Vta1Q9CR26 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.67■■□□□ 1.38
Vta1Q9CR26 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Vta1Q9CR26 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC23.66■■□□□ 1.38
Vta1Q9CR26 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Vta1Q9CR26 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Vta1Q9CR26 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Vta1Q9CR26 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Vta1Q9CR26 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
Vta1Q9CR26 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Vta1Q9CR26 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Vta1Q9CR26 Slc35b2-207ENSMUST00000226086 850 ntBASIC23.65■■□□□ 1.38
Vta1Q9CR26 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Vta1Q9CR26 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Vta1Q9CR26 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Vta1Q9CR26 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Vta1Q9CR26 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Vta1Q9CR26 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Vta1Q9CR26 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Vta1Q9CR26 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Vta1Q9CR26 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Vta1Q9CR26 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Vta1Q9CR26 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Vta1Q9CR26 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
Vta1Q9CR26 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Vta1Q9CR26 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Vta1Q9CR26 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Vta1Q9CR26 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Vta1Q9CR26 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Vta1Q9CR26 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Vta1Q9CR26 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
Vta1Q9CR26 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC23.62■■□□□ 1.37
Vta1Q9CR26 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Vta1Q9CR26 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Vta1Q9CR26 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC23.62■■□□□ 1.37
Vta1Q9CR26 Gm43530-201ENSMUST00000195920 274 ntBASIC23.61■■□□□ 1.37
Vta1Q9CR26 Gm43173-201ENSMUST00000202246 593 ntBASIC23.61■■□□□ 1.37
Vta1Q9CR26 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC23.61■■□□□ 1.37
Vta1Q9CR26 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Vta1Q9CR26 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Vta1Q9CR26 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms