Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt88Q9CPR6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.67■□□□□ 0.58
Krt88Q9CPR6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.67■□□□□ 0.58
Krt88Q9CPR6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt88Q9CPR6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt88Q9CPR6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Krt88Q9CPR6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt88Q9CPR6 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.67■□□□□ 0.58
Krt88Q9CPR6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt88Q9CPR6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Krt88Q9CPR6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Krt88Q9CPR6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Krt88Q9CPR6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Krt88Q9CPR6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Krt88Q9CPR6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt88Q9CPR6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Krt88Q9CPR6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Krt88Q9CPR6 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.65■□□□□ 0.58
Krt88Q9CPR6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt88Q9CPR6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt88Q9CPR6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt88Q9CPR6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt88Q9CPR6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.65■□□□□ 0.58
Krt88Q9CPR6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt88Q9CPR6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Krt88Q9CPR6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Krt88Q9CPR6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Krt88Q9CPR6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt88Q9CPR6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt88Q9CPR6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt88Q9CPR6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.64■□□□□ 0.57
Krt88Q9CPR6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt88Q9CPR6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt88Q9CPR6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt88Q9CPR6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Krt88Q9CPR6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt88Q9CPR6 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.63■□□□□ 0.57
Krt88Q9CPR6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt88Q9CPR6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt88Q9CPR6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Krt88Q9CPR6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt88Q9CPR6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt88Q9CPR6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt88Q9CPR6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Krt88Q9CPR6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Krt88Q9CPR6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Krt88Q9CPR6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt88Q9CPR6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt88Q9CPR6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt88Q9CPR6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Krt88Q9CPR6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt88Q9CPR6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt88Q9CPR6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt88Q9CPR6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Krt88Q9CPR6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Krt88Q9CPR6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt88Q9CPR6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt88Q9CPR6 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.62■□□□□ 0.57
Krt88Q9CPR6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Krt88Q9CPR6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt88Q9CPR6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.61■□□□□ 0.57
Krt88Q9CPR6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt88Q9CPR6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Krt88Q9CPR6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.61■□□□□ 0.57
Krt88Q9CPR6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt88Q9CPR6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Krt88Q9CPR6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt88Q9CPR6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Krt88Q9CPR6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt88Q9CPR6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt88Q9CPR6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Krt88Q9CPR6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt88Q9CPR6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt88Q9CPR6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Krt88Q9CPR6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Krt88Q9CPR6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt88Q9CPR6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Krt88Q9CPR6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Krt88Q9CPR6 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.6■□□□□ 0.57
Krt88Q9CPR6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt88Q9CPR6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Krt88Q9CPR6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt88Q9CPR6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt88Q9CPR6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Krt88Q9CPR6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt88Q9CPR6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Krt88Q9CPR6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt88Q9CPR6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt88Q9CPR6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt88Q9CPR6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt88Q9CPR6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Krt88Q9CPR6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Krt88Q9CPR6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Krt88Q9CPR6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Krt88Q9CPR6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.58■□□□□ 0.57
Krt88Q9CPR6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt88Q9CPR6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt88Q9CPR6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
Krt88Q9CPR6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt88Q9CPR6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms