Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.34■□□□□ 0.53
Rtn4rQ99PI8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4rQ99PI8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.34■□□□□ 0.53
Rtn4rQ99PI8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4rQ99PI8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4rQ99PI8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn4rQ99PI8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn4rQ99PI8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn4rQ99PI8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn4rQ99PI8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Rtn4rQ99PI8 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.33■□□□□ 0.52
Rtn4rQ99PI8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn4rQ99PI8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn4rQ99PI8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rtn4rQ99PI8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn4rQ99PI8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn4rQ99PI8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn4rQ99PI8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rtn4rQ99PI8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.32■□□□□ 0.52
Rtn4rQ99PI8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn4rQ99PI8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn4rQ99PI8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn4rQ99PI8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn4rQ99PI8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4rQ99PI8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rtn4rQ99PI8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4rQ99PI8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4rQ99PI8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4rQ99PI8 Gm7417-201ENSMUST00000192950 473 ntBASIC18.31■□□□□ 0.52
Rtn4rQ99PI8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.31■□□□□ 0.52
Rtn4rQ99PI8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4rQ99PI8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4rQ99PI8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4rQ99PI8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4rQ99PI8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4rQ99PI8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.3■□□□□ 0.52
Rtn4rQ99PI8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4rQ99PI8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4rQ99PI8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4rQ99PI8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4rQ99PI8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4rQ99PI8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4rQ99PI8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4rQ99PI8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4rQ99PI8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4rQ99PI8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4rQ99PI8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Rtn4rQ99PI8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.28■□□□□ 0.52
Rtn4rQ99PI8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.28■□□□□ 0.52
Rtn4rQ99PI8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4rQ99PI8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4rQ99PI8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4rQ99PI8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4rQ99PI8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4rQ99PI8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4rQ99PI8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4rQ99PI8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.26■□□□□ 0.51
Rtn4rQ99PI8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4rQ99PI8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4rQ99PI8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4rQ99PI8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4rQ99PI8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4rQ99PI8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4rQ99PI8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Rtn4rQ99PI8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4rQ99PI8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn4rQ99PI8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn4rQ99PI8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn4rQ99PI8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.25■□□□□ 0.51
Rtn4rQ99PI8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.25■□□□□ 0.51
Rtn4rQ99PI8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.25■□□□□ 0.51
Rtn4rQ99PI8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn4rQ99PI8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn4rQ99PI8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn4rQ99PI8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn4rQ99PI8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.24■□□□□ 0.51
Rtn4rQ99PI8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.24■□□□□ 0.51
Rtn4rQ99PI8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.24■□□□□ 0.51
Rtn4rQ99PI8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn4rQ99PI8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn4rQ99PI8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rtn4rQ99PI8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Rtn4rQ99PI8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Rtn4rQ99PI8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtn4rQ99PI8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rtn4rQ99PI8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtn4rQ99PI8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.22■□□□□ 0.51
Rtn4rQ99PI8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.22■□□□□ 0.51
Rtn4rQ99PI8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn4rQ99PI8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn4rQ99PI8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.22■□□□□ 0.51
Rtn4rQ99PI8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.22■□□□□ 0.51
Rtn4rQ99PI8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.22■□□□□ 0.51
Rtn4rQ99PI8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn4rQ99PI8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn4rQ99PI8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rtn4rQ99PI8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rtn4rQ99PI8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn4rQ99PI8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.21■□□□□ 0.51
Rtn4rQ99PI8 Gm22238-201ENSMUST00000175222 88 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms