Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx6-1Q99MA9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.58■□□□□ 0.73
Nkx6-1Q99MA9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nkx6-1Q99MA9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx6-1Q99MA9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.58■□□□□ 0.72
Nkx6-1Q99MA9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx6-1Q99MA9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.58■□□□□ 0.72
Nkx6-1Q99MA9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx6-1Q99MA9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx6-1Q99MA9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx6-1Q99MA9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx6-1Q99MA9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx6-1Q99MA9 Gm26571-201ENSMUST00000181399 666 ntBASIC19.57■□□□□ 0.72
Nkx6-1Q99MA9 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.57■□□□□ 0.72
Nkx6-1Q99MA9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx6-1Q99MA9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Nkx6-1Q99MA9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx6-1Q99MA9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx6-1Q99MA9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.56■□□□□ 0.72
Nkx6-1Q99MA9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx6-1Q99MA9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx6-1Q99MA9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Nkx6-1Q99MA9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx6-1Q99MA9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx6-1Q99MA9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx6-1Q99MA9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx6-1Q99MA9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.56■□□□□ 0.72
Nkx6-1Q99MA9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Nkx6-1Q99MA9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx6-1Q99MA9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx6-1Q99MA9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx6-1Q99MA9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx6-1Q99MA9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx6-1Q99MA9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.56■□□□□ 0.72
Nkx6-1Q99MA9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx6-1Q99MA9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.55■□□□□ 0.72
Nkx6-1Q99MA9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Nkx6-1Q99MA9 Gm12251-201ENSMUST00000117893 792 ntBASIC19.55■□□□□ 0.72
Nkx6-1Q99MA9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx6-1Q99MA9 Gm27405-201ENSMUST00000184201 112 ntBASIC19.55■□□□□ 0.72
Nkx6-1Q99MA9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.55■□□□□ 0.72
Nkx6-1Q99MA9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx6-1Q99MA9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx6-1Q99MA9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Nkx6-1Q99MA9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx6-1Q99MA9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Nkx6-1Q99MA9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx6-1Q99MA9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx6-1Q99MA9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Nkx6-1Q99MA9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx6-1Q99MA9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Nkx6-1Q99MA9 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.54■□□□□ 0.72
Nkx6-1Q99MA9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx6-1Q99MA9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx6-1Q99MA9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx6-1Q99MA9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
Nkx6-1Q99MA9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Nkx6-1Q99MA9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx6-1Q99MA9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx6-1Q99MA9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.53■□□□□ 0.72
Nkx6-1Q99MA9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx6-1Q99MA9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Nkx6-1Q99MA9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx6-1Q99MA9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Nkx6-1Q99MA9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx6-1Q99MA9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.52■□□□□ 0.72
Nkx6-1Q99MA9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx6-1Q99MA9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Nkx6-1Q99MA9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Nkx6-1Q99MA9 Gm26833-201ENSMUST00000180899 440 ntBASIC19.52■□□□□ 0.72
Nkx6-1Q99MA9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx6-1Q99MA9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
Nkx6-1Q99MA9 Gm10493-201ENSMUST00000097270 612 ntBASIC19.52■□□□□ 0.72
Nkx6-1Q99MA9 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.52■□□□□ 0.72
Nkx6-1Q99MA9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Nkx6-1Q99MA9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Nkx6-1Q99MA9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Nkx6-1Q99MA9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
Nkx6-1Q99MA9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx6-1Q99MA9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx6-1Q99MA9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx6-1Q99MA9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx6-1Q99MA9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.51■□□□□ 0.71
Nkx6-1Q99MA9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.51■□□□□ 0.71
Nkx6-1Q99MA9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.51■□□□□ 0.71
Nkx6-1Q99MA9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Nkx6-1Q99MA9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx6-1Q99MA9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx6-1Q99MA9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx6-1Q99MA9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx6-1Q99MA9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx6-1Q99MA9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx6-1Q99MA9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx6-1Q99MA9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx6-1Q99MA9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx6-1Q99MA9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx6-1Q99MA9 Gm42642-201ENSMUST00000200683 355 ntBASIC19.5■□□□□ 0.71
Nkx6-1Q99MA9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx6-1Q99MA9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx6-1Q99MA9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms