Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Smc1bQ920F6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smc1bQ920F6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smc1bQ920F6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smc1bQ920F6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Smc1bQ920F6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smc1bQ920F6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Smc1bQ920F6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Smc1bQ920F6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smc1bQ920F6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smc1bQ920F6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Smc1bQ920F6 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.86■■□□□ 1.41
Smc1bQ920F6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smc1bQ920F6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Smc1bQ920F6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
Smc1bQ920F6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smc1bQ920F6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smc1bQ920F6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smc1bQ920F6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Smc1bQ920F6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Smc1bQ920F6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Smc1bQ920F6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Smc1bQ920F6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Smc1bQ920F6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Smc1bQ920F6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC23.83■■□□□ 1.41
Smc1bQ920F6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC23.83■■□□□ 1.41
Smc1bQ920F6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Smc1bQ920F6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Smc1bQ920F6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Smc1bQ920F6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC23.83■■□□□ 1.4
Smc1bQ920F6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Smc1bQ920F6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smc1bQ920F6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Smc1bQ920F6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smc1bQ920F6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC23.82■■□□□ 1.4
Smc1bQ920F6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC23.82■■□□□ 1.4
Smc1bQ920F6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Smc1bQ920F6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smc1bQ920F6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smc1bQ920F6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.82■■□□□ 1.4
Smc1bQ920F6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.81■■□□□ 1.4
Smc1bQ920F6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC23.81■■□□□ 1.4
Smc1bQ920F6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smc1bQ920F6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smc1bQ920F6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Smc1bQ920F6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smc1bQ920F6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Smc1bQ920F6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Smc1bQ920F6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Smc1bQ920F6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Smc1bQ920F6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smc1bQ920F6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Smc1bQ920F6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
Smc1bQ920F6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Smc1bQ920F6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.79■■□□□ 1.4
Smc1bQ920F6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Smc1bQ920F6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC23.79■■□□□ 1.4
Smc1bQ920F6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC23.79■■□□□ 1.4
Smc1bQ920F6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Smc1bQ920F6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Smc1bQ920F6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Smc1bQ920F6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.78■■□□□ 1.4
Smc1bQ920F6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smc1bQ920F6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smc1bQ920F6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC23.78■■□□□ 1.4
Smc1bQ920F6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC23.78■■□□□ 1.4
Smc1bQ920F6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smc1bQ920F6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smc1bQ920F6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Smc1bQ920F6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Smc1bQ920F6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Smc1bQ920F6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Smc1bQ920F6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Smc1bQ920F6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Smc1bQ920F6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Smc1bQ920F6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Smc1bQ920F6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Smc1bQ920F6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Smc1bQ920F6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Smc1bQ920F6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Smc1bQ920F6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.76■■□□□ 1.39
Smc1bQ920F6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC23.76■■□□□ 1.39
Smc1bQ920F6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Smc1bQ920F6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Smc1bQ920F6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smc1bQ920F6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smc1bQ920F6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smc1bQ920F6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC23.75■■□□□ 1.39
Smc1bQ920F6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smc1bQ920F6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Smc1bQ920F6 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.74■■□□□ 1.39
Smc1bQ920F6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Smc1bQ920F6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Smc1bQ920F6 Gm9207-201ENSMUST00000198773 1115 ntBASIC23.74■■□□□ 1.39
Smc1bQ920F6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Smc1bQ920F6 Gm2011-201ENSMUST00000203124 1263 ntBASIC23.73■■□□□ 1.39
Smc1bQ920F6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Smc1bQ920F6 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
Smc1bQ920F6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Smc1bQ920F6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms