Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC24.4■■□□□ 1.5
Pcdhb22Q91XZ8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC24.4■■□□□ 1.5
Pcdhb22Q91XZ8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb22Q91XZ8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb22Q91XZ8 Etf1-202ENSMUST00000180351 108 ntBASIC24.4■■□□□ 1.5
Pcdhb22Q91XZ8 Gm7417-201ENSMUST00000192950 473 ntBASIC24.4■■□□□ 1.5
Pcdhb22Q91XZ8 Gm45102-201ENSMUST00000207427 857 ntBASIC24.4■■□□□ 1.5
Pcdhb22Q91XZ8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb22Q91XZ8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb22Q91XZ8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Pcdhb22Q91XZ8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Pcdhb22Q91XZ8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhb22Q91XZ8 Gm5913-201ENSMUST00000119397 1399 ntBASIC24.39■■□□□ 1.49
Pcdhb22Q91XZ8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC24.38■■□□□ 1.49
Pcdhb22Q91XZ8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC24.38■■□□□ 1.49
Pcdhb22Q91XZ8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC24.38■■□□□ 1.49
Pcdhb22Q91XZ8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb22Q91XZ8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb22Q91XZ8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb22Q91XZ8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb22Q91XZ8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC24.37■■□□□ 1.49
Pcdhb22Q91XZ8 Rps24-207ENSMUST00000224568 714 ntBASIC24.37■■□□□ 1.49
Pcdhb22Q91XZ8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC24.37■■□□□ 1.49
Pcdhb22Q91XZ8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb22Q91XZ8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb22Q91XZ8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb22Q91XZ8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb22Q91XZ8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhb22Q91XZ8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhb22Q91XZ8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhb22Q91XZ8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb22Q91XZ8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb22Q91XZ8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Pcdhb22Q91XZ8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb22Q91XZ8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb22Q91XZ8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC24.35■■□□□ 1.49
Pcdhb22Q91XZ8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb22Q91XZ8 Gm4430-201ENSMUST00000192413 1943 ntBASIC24.35■■□□□ 1.49
Pcdhb22Q91XZ8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC24.35■■□□□ 1.49
Pcdhb22Q91XZ8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb22Q91XZ8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb22Q91XZ8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb22Q91XZ8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC24.34■■□□□ 1.49
Pcdhb22Q91XZ8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC24.34■■□□□ 1.49
Pcdhb22Q91XZ8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC24.34■■□□□ 1.49
Pcdhb22Q91XZ8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb22Q91XZ8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
Pcdhb22Q91XZ8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb22Q91XZ8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhb22Q91XZ8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.33■■□□□ 1.49
Pcdhb22Q91XZ8 Gm14117-201ENSMUST00000122417 843 ntBASIC24.33■■□□□ 1.49
Pcdhb22Q91XZ8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhb22Q91XZ8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhb22Q91XZ8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhb22Q91XZ8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhb22Q91XZ8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC24.33■■□□□ 1.49
Pcdhb22Q91XZ8 Gm12504-201ENSMUST00000120860 2231 ntBASIC24.33■■□□□ 1.48
Pcdhb22Q91XZ8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhb22Q91XZ8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhb22Q91XZ8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhb22Q91XZ8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhb22Q91XZ8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Pcdhb22Q91XZ8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC24.32■■□□□ 1.48
Pcdhb22Q91XZ8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhb22Q91XZ8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhb22Q91XZ8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhb22Q91XZ8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Pcdhb22Q91XZ8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhb22Q91XZ8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC24.31■■□□□ 1.48
Pcdhb22Q91XZ8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb22Q91XZ8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
Pcdhb22Q91XZ8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb22Q91XZ8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb22Q91XZ8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb22Q91XZ8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC24.3■■□□□ 1.48
Pcdhb22Q91XZ8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC24.3■■□□□ 1.48
Pcdhb22Q91XZ8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb22Q91XZ8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb22Q91XZ8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb22Q91XZ8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb22Q91XZ8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Pcdhb22Q91XZ8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb22Q91XZ8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb22Q91XZ8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb22Q91XZ8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb22Q91XZ8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb22Q91XZ8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb22Q91XZ8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb22Q91XZ8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Pcdhb22Q91XZ8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhb22Q91XZ8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhb22Q91XZ8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhb22Q91XZ8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhb22Q91XZ8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhb22Q91XZ8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhb22Q91XZ8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhb22Q91XZ8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhb22Q91XZ8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhb22Q91XZ8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhb22Q91XZ8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC24.26■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms