Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb3Q91XZ7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Pcdhb3Q91XZ7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pcdhb3Q91XZ7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb3Q91XZ7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb3Q91XZ7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb3Q91XZ7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb3Q91XZ7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb3Q91XZ7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb3Q91XZ7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.57■□□□□ 0.88
Pcdhb3Q91XZ7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb3Q91XZ7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb3Q91XZ7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb3Q91XZ7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.57■□□□□ 0.88
Pcdhb3Q91XZ7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
Pcdhb3Q91XZ7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb3Q91XZ7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb3Q91XZ7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb3Q91XZ7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Pcdhb3Q91XZ7 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.56■□□□□ 0.88
Pcdhb3Q91XZ7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb3Q91XZ7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pcdhb3Q91XZ7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
Pcdhb3Q91XZ7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb3Q91XZ7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb3Q91XZ7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb3Q91XZ7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pcdhb3Q91XZ7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.55■□□□□ 0.88
Pcdhb3Q91XZ7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcdhb3Q91XZ7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pcdhb3Q91XZ7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Pcdhb3Q91XZ7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.54■□□□□ 0.88
Pcdhb3Q91XZ7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb3Q91XZ7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb3Q91XZ7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.54■□□□□ 0.88
Pcdhb3Q91XZ7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb3Q91XZ7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb3Q91XZ7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Pcdhb3Q91XZ7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.53■□□□□ 0.88
Pcdhb3Q91XZ7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb3Q91XZ7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb3Q91XZ7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb3Q91XZ7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb3Q91XZ7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb3Q91XZ7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Pcdhb3Q91XZ7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb3Q91XZ7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb3Q91XZ7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb3Q91XZ7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb3Q91XZ7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb3Q91XZ7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Pcdhb3Q91XZ7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb3Q91XZ7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb3Q91XZ7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Pcdhb3Q91XZ7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb3Q91XZ7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb3Q91XZ7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb3Q91XZ7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb3Q91XZ7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.51■□□□□ 0.87
Pcdhb3Q91XZ7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb3Q91XZ7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb3Q91XZ7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb3Q91XZ7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhb3Q91XZ7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb3Q91XZ7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Pcdhb3Q91XZ7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb3Q91XZ7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhb3Q91XZ7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb3Q91XZ7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb3Q91XZ7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pcdhb3Q91XZ7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb3Q91XZ7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb3Q91XZ7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb3Q91XZ7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb3Q91XZ7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb3Q91XZ7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb3Q91XZ7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb3Q91XZ7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb3Q91XZ7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb3Q91XZ7 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.49■□□□□ 0.87
Pcdhb3Q91XZ7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb3Q91XZ7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb3Q91XZ7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb3Q91XZ7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb3Q91XZ7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb3Q91XZ7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb3Q91XZ7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb3Q91XZ7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb3Q91XZ7 Gm10420-201ENSMUST00000121713 882 ntBASIC20.48■□□□□ 0.87
Pcdhb3Q91XZ7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb3Q91XZ7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Pcdhb3Q91XZ7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Pcdhb3Q91XZ7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb3Q91XZ7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb3Q91XZ7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb3Q91XZ7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb3Q91XZ7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Pcdhb3Q91XZ7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb3Q91XZ7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb3Q91XZ7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms