Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb8Q91XZ2 Gm13238-201ENSMUST00000117655 780 ntBASIC20.27■□□□□ 0.84
Pcdhb8Q91XZ2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhb8Q91XZ2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb8Q91XZ2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb8Q91XZ2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdhb8Q91XZ2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb8Q91XZ2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb8Q91XZ2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb8Q91XZ2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb8Q91XZ2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdhb8Q91XZ2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.26■□□□□ 0.83
Pcdhb8Q91XZ2 Gm43566-201ENSMUST00000196851 808 ntBASIC20.26■□□□□ 0.83
Pcdhb8Q91XZ2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.26■□□□□ 0.83
Pcdhb8Q91XZ2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb8Q91XZ2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb8Q91XZ2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb8Q91XZ2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb8Q91XZ2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhb8Q91XZ2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.25■□□□□ 0.83
Pcdhb8Q91XZ2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb8Q91XZ2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Pcdhb8Q91XZ2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb8Q91XZ2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb8Q91XZ2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb8Q91XZ2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhb8Q91XZ2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb8Q91XZ2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.24■□□□□ 0.83
Pcdhb8Q91XZ2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb8Q91XZ2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb8Q91XZ2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb8Q91XZ2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb8Q91XZ2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb8Q91XZ2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb8Q91XZ2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb8Q91XZ2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb8Q91XZ2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb8Q91XZ2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb8Q91XZ2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
Pcdhb8Q91XZ2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhb8Q91XZ2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb8Q91XZ2 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.23■□□□□ 0.83
Pcdhb8Q91XZ2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb8Q91XZ2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb8Q91XZ2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb8Q91XZ2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb8Q91XZ2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb8Q91XZ2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb8Q91XZ2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb8Q91XZ2 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.22■□□□□ 0.83
Pcdhb8Q91XZ2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb8Q91XZ2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb8Q91XZ2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb8Q91XZ2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb8Q91XZ2 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.21■□□□□ 0.83
Pcdhb8Q91XZ2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb8Q91XZ2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pcdhb8Q91XZ2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb8Q91XZ2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb8Q91XZ2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhb8Q91XZ2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.2■□□□□ 0.82
Pcdhb8Q91XZ2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb8Q91XZ2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Pcdhb8Q91XZ2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb8Q91XZ2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhb8Q91XZ2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb8Q91XZ2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb8Q91XZ2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb8Q91XZ2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pcdhb8Q91XZ2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb8Q91XZ2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhb8Q91XZ2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb8Q91XZ2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb8Q91XZ2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb8Q91XZ2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb8Q91XZ2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Pcdhb8Q91XZ2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pcdhb8Q91XZ2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb8Q91XZ2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Pcdhb8Q91XZ2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb8Q91XZ2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb8Q91XZ2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb8Q91XZ2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb8Q91XZ2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.18■□□□□ 0.82
Pcdhb8Q91XZ2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb8Q91XZ2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.18■□□□□ 0.82
Pcdhb8Q91XZ2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb8Q91XZ2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.17■□□□□ 0.82
Pcdhb8Q91XZ2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pcdhb8Q91XZ2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.17■□□□□ 0.82
Pcdhb8Q91XZ2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb8Q91XZ2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb8Q91XZ2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb8Q91XZ2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb8Q91XZ2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.17■□□□□ 0.82
Pcdhb8Q91XZ2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb8Q91XZ2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb8Q91XZ2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.16■□□□□ 0.82
Pcdhb8Q91XZ2 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.16■□□□□ 0.82
Pcdhb8Q91XZ2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms