Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhga11Q91XY8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Pcdhga11Q91XY8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhga11Q91XY8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhga11Q91XY8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhga11Q91XY8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhga11Q91XY8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhga11Q91XY8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhga11Q91XY8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.96■□□□□ 0.79
Pcdhga11Q91XY8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.96■□□□□ 0.79
Pcdhga11Q91XY8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.96■□□□□ 0.79
Pcdhga11Q91XY8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Pcdhga11Q91XY8 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.96■□□□□ 0.79
Pcdhga11Q91XY8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhga11Q91XY8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhga11Q91XY8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhga11Q91XY8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhga11Q91XY8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhga11Q91XY8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.95■□□□□ 0.78
Pcdhga11Q91XY8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhga11Q91XY8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhga11Q91XY8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhga11Q91XY8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Pcdhga11Q91XY8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Pcdhga11Q91XY8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhga11Q91XY8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhga11Q91XY8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhga11Q91XY8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Pcdhga11Q91XY8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhga11Q91XY8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhga11Q91XY8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhga11Q91XY8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Pcdhga11Q91XY8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.94■□□□□ 0.78
Pcdhga11Q91XY8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhga11Q91XY8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhga11Q91XY8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhga11Q91XY8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.94■□□□□ 0.78
Pcdhga11Q91XY8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhga11Q91XY8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhga11Q91XY8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhga11Q91XY8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Pcdhga11Q91XY8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhga11Q91XY8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Pcdhga11Q91XY8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhga11Q91XY8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga11Q91XY8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Pcdhga11Q91XY8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga11Q91XY8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga11Q91XY8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga11Q91XY8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga11Q91XY8 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.92■□□□□ 0.78
Pcdhga11Q91XY8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga11Q91XY8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhga11Q91XY8 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.91■□□□□ 0.78
Pcdhga11Q91XY8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhga11Q91XY8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhga11Q91XY8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhga11Q91XY8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga11Q91XY8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Pcdhga11Q91XY8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga11Q91XY8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga11Q91XY8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
Pcdhga11Q91XY8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Pcdhga11Q91XY8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.9■□□□□ 0.78
Pcdhga11Q91XY8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Pcdhga11Q91XY8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.9■□□□□ 0.78
Pcdhga11Q91XY8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga11Q91XY8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pcdhga11Q91XY8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Pcdhga11Q91XY8 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.89■□□□□ 0.77
Pcdhga11Q91XY8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhga11Q91XY8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Pcdhga11Q91XY8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.89■□□□□ 0.77
Pcdhga11Q91XY8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhga11Q91XY8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.89■□□□□ 0.77
Pcdhga11Q91XY8 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.89■□□□□ 0.77
Pcdhga11Q91XY8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhga11Q91XY8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhga11Q91XY8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.89■□□□□ 0.77
Pcdhga11Q91XY8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhga11Q91XY8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhga11Q91XY8 Gm5812-201ENSMUST00000061073 957 ntBASIC19.89■□□□□ 0.77
Pcdhga11Q91XY8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhga11Q91XY8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhga11Q91XY8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Pcdhga11Q91XY8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.88■□□□□ 0.77
Pcdhga11Q91XY8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga11Q91XY8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Pcdhga11Q91XY8 Gm45444-201ENSMUST00000211394 898 ntBASIC19.88■□□□□ 0.77
Pcdhga11Q91XY8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga11Q91XY8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga11Q91XY8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga11Q91XY8 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.88■□□□□ 0.77
Pcdhga11Q91XY8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga11Q91XY8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga11Q91XY8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
Pcdhga11Q91XY8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga11Q91XY8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga11Q91XY8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga11Q91XY8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms