Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tram1Q91V04 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tram1Q91V04 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tram1Q91V04 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Tram1Q91V04 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tram1Q91V04 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.82■□□□□ 0.44
Tram1Q91V04 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.82■□□□□ 0.44
Tram1Q91V04 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Tram1Q91V04 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Tram1Q91V04 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tram1Q91V04 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Tram1Q91V04 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tram1Q91V04 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tram1Q91V04 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tram1Q91V04 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tram1Q91V04 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tram1Q91V04 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tram1Q91V04 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Tram1Q91V04 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tram1Q91V04 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tram1Q91V04 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tram1Q91V04 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tram1Q91V04 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tram1Q91V04 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tram1Q91V04 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tram1Q91V04 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tram1Q91V04 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.8■□□□□ 0.44
Tram1Q91V04 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tram1Q91V04 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tram1Q91V04 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tram1Q91V04 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tram1Q91V04 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tram1Q91V04 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tram1Q91V04 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tram1Q91V04 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Tram1Q91V04 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Tram1Q91V04 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tram1Q91V04 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tram1Q91V04 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
Tram1Q91V04 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Tram1Q91V04 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tram1Q91V04 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tram1Q91V04 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tram1Q91V04 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tram1Q91V04 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Tram1Q91V04 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tram1Q91V04 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tram1Q91V04 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.78■□□□□ 0.44
Tram1Q91V04 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Tram1Q91V04 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tram1Q91V04 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tram1Q91V04 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Tram1Q91V04 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Tram1Q91V04 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tram1Q91V04 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tram1Q91V04 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.77■□□□□ 0.44
Tram1Q91V04 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.77■□□□□ 0.44
Tram1Q91V04 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tram1Q91V04 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tram1Q91V04 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tram1Q91V04 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tram1Q91V04 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tram1Q91V04 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tram1Q91V04 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Tram1Q91V04 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tram1Q91V04 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Tram1Q91V04 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tram1Q91V04 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tram1Q91V04 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tram1Q91V04 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tram1Q91V04 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tram1Q91V04 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tram1Q91V04 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tram1Q91V04 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tram1Q91V04 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tram1Q91V04 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tram1Q91V04 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tram1Q91V04 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tram1Q91V04 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tram1Q91V04 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.75■□□□□ 0.43
Tram1Q91V04 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tram1Q91V04 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Tram1Q91V04 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tram1Q91V04 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Tram1Q91V04 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.74■□□□□ 0.43
Tram1Q91V04 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tram1Q91V04 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tram1Q91V04 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tram1Q91V04 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tram1Q91V04 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tram1Q91V04 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tram1Q91V04 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Tram1Q91V04 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.74■□□□□ 0.43
Tram1Q91V04 Gm8503-201ENSMUST00000118131 455 ntBASIC17.74■□□□□ 0.43
Tram1Q91V04 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Tram1Q91V04 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Tram1Q91V04 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tram1Q91V04 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tram1Q91V04 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tram1Q91V04 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms