Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.85■□□□□ 0.77
Pcdh18Q8VHR0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.85■□□□□ 0.77
Pcdh18Q8VHR0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh18Q8VHR0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Pcdh18Q8VHR0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh18Q8VHR0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Pcdh18Q8VHR0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh18Q8VHR0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh18Q8VHR0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh18Q8VHR0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh18Q8VHR0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdh18Q8VHR0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh18Q8VHR0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.84■□□□□ 0.77
Pcdh18Q8VHR0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh18Q8VHR0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh18Q8VHR0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh18Q8VHR0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh18Q8VHR0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh18Q8VHR0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh18Q8VHR0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh18Q8VHR0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh18Q8VHR0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh18Q8VHR0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh18Q8VHR0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Pcdh18Q8VHR0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh18Q8VHR0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh18Q8VHR0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh18Q8VHR0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdh18Q8VHR0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdh18Q8VHR0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdh18Q8VHR0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdh18Q8VHR0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh18Q8VHR0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh18Q8VHR0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Pcdh18Q8VHR0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.82■□□□□ 0.76
Pcdh18Q8VHR0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh18Q8VHR0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh18Q8VHR0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh18Q8VHR0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdh18Q8VHR0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh18Q8VHR0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh18Q8VHR0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh18Q8VHR0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh18Q8VHR0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Pcdh18Q8VHR0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh18Q8VHR0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Pcdh18Q8VHR0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh18Q8VHR0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.81■□□□□ 0.76
Pcdh18Q8VHR0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh18Q8VHR0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh18Q8VHR0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdh18Q8VHR0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh18Q8VHR0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh18Q8VHR0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh18Q8VHR0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh18Q8VHR0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdh18Q8VHR0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh18Q8VHR0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.79■□□□□ 0.76
Pcdh18Q8VHR0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh18Q8VHR0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh18Q8VHR0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh18Q8VHR0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh18Q8VHR0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh18Q8VHR0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh18Q8VHR0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh18Q8VHR0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh18Q8VHR0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.78■□□□□ 0.76
Pcdh18Q8VHR0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.78■□□□□ 0.76
Pcdh18Q8VHR0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh18Q8VHR0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh18Q8VHR0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh18Q8VHR0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh18Q8VHR0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh18Q8VHR0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh18Q8VHR0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh18Q8VHR0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh18Q8VHR0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcdh18Q8VHR0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh18Q8VHR0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Pcdh18Q8VHR0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh18Q8VHR0 Gm11175-201ENSMUST00000116172 543 ntBASIC19.76■□□□□ 0.75
Pcdh18Q8VHR0 Gm27502-201ENSMUST00000183495 199 ntBASIC19.76■□□□□ 0.75
Pcdh18Q8VHR0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh18Q8VHR0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Pcdh18Q8VHR0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh18Q8VHR0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Pcdh18Q8VHR0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh18Q8VHR0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh18Q8VHR0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh18Q8VHR0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh18Q8VHR0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh18Q8VHR0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdh18Q8VHR0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh18Q8VHR0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh18Q8VHR0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh18Q8VHR0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh18Q8VHR0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh18Q8VHR0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh18Q8VHR0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh18Q8VHR0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms