Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ndc1Q8VCB1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ndc1Q8VCB1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.59■□□□□ 0.73
Ndc1Q8VCB1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ndc1Q8VCB1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Ndc1Q8VCB1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ndc1Q8VCB1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Ndc1Q8VCB1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ndc1Q8VCB1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.58■□□□□ 0.72
Ndc1Q8VCB1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ndc1Q8VCB1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.58■□□□□ 0.72
Ndc1Q8VCB1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ndc1Q8VCB1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ndc1Q8VCB1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ndc1Q8VCB1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ndc1Q8VCB1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ndc1Q8VCB1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ndc1Q8VCB1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ndc1Q8VCB1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ndc1Q8VCB1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ndc1Q8VCB1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ndc1Q8VCB1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ndc1Q8VCB1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ndc1Q8VCB1 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.57■□□□□ 0.72
Ndc1Q8VCB1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ndc1Q8VCB1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ndc1Q8VCB1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ndc1Q8VCB1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ndc1Q8VCB1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.56■□□□□ 0.72
Ndc1Q8VCB1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ndc1Q8VCB1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ndc1Q8VCB1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ndc1Q8VCB1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ndc1Q8VCB1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ndc1Q8VCB1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Ndc1Q8VCB1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ndc1Q8VCB1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ndc1Q8VCB1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ndc1Q8VCB1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ndc1Q8VCB1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ndc1Q8VCB1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ndc1Q8VCB1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ndc1Q8VCB1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ndc1Q8VCB1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ndc1Q8VCB1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ndc1Q8VCB1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ndc1Q8VCB1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ndc1Q8VCB1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ndc1Q8VCB1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ndc1Q8VCB1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ndc1Q8VCB1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ndc1Q8VCB1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ndc1Q8VCB1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ndc1Q8VCB1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ndc1Q8VCB1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ndc1Q8VCB1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
Ndc1Q8VCB1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ndc1Q8VCB1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.53■□□□□ 0.72
Ndc1Q8VCB1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.53■□□□□ 0.72
Ndc1Q8VCB1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.53■□□□□ 0.72
Ndc1Q8VCB1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ndc1Q8VCB1 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.53■□□□□ 0.72
Ndc1Q8VCB1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.53■□□□□ 0.72
Ndc1Q8VCB1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Ndc1Q8VCB1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ndc1Q8VCB1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ndc1Q8VCB1 Gm21956-201ENSMUST00000179946 522 ntBASIC19.52■□□□□ 0.72
Ndc1Q8VCB1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ndc1Q8VCB1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ndc1Q8VCB1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.51■□□□□ 0.71
Ndc1Q8VCB1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ndc1Q8VCB1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ndc1Q8VCB1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ndc1Q8VCB1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ndc1Q8VCB1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.51■□□□□ 0.71
Ndc1Q8VCB1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ndc1Q8VCB1 Gm12922-201ENSMUST00000120626 809 ntBASIC19.51■□□□□ 0.71
Ndc1Q8VCB1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.51■□□□□ 0.71
Ndc1Q8VCB1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.51■□□□□ 0.71
Ndc1Q8VCB1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ndc1Q8VCB1 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.51■□□□□ 0.71
Ndc1Q8VCB1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ndc1Q8VCB1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.51■□□□□ 0.71
Ndc1Q8VCB1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ndc1Q8VCB1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.5■□□□□ 0.71
Ndc1Q8VCB1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ndc1Q8VCB1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ndc1Q8VCB1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ndc1Q8VCB1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ndc1Q8VCB1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ndc1Q8VCB1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ndc1Q8VCB1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
Ndc1Q8VCB1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ndc1Q8VCB1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ndc1Q8VCB1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.48■□□□□ 0.71
Ndc1Q8VCB1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ndc1Q8VCB1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ndc1Q8VCB1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ndc1Q8VCB1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ndc1Q8VCB1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms