Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nudcd3Q8R1N4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Nudcd3Q8R1N4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nudcd3Q8R1N4 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.7■□□□□ 0.9
Nudcd3Q8R1N4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nudcd3Q8R1N4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Nudcd3Q8R1N4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nudcd3Q8R1N4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Nudcd3Q8R1N4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nudcd3Q8R1N4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Nudcd3Q8R1N4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nudcd3Q8R1N4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nudcd3Q8R1N4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Nudcd3Q8R1N4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nudcd3Q8R1N4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nudcd3Q8R1N4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nudcd3Q8R1N4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Nudcd3Q8R1N4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nudcd3Q8R1N4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nudcd3Q8R1N4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nudcd3Q8R1N4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nudcd3Q8R1N4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nudcd3Q8R1N4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nudcd3Q8R1N4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nudcd3Q8R1N4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nudcd3Q8R1N4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nudcd3Q8R1N4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nudcd3Q8R1N4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nudcd3Q8R1N4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Nudcd3Q8R1N4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nudcd3Q8R1N4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.68■□□□□ 0.9
Nudcd3Q8R1N4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nudcd3Q8R1N4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nudcd3Q8R1N4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nudcd3Q8R1N4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Nudcd3Q8R1N4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nudcd3Q8R1N4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nudcd3Q8R1N4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nudcd3Q8R1N4 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.67■□□□□ 0.9
Nudcd3Q8R1N4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nudcd3Q8R1N4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nudcd3Q8R1N4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nudcd3Q8R1N4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nudcd3Q8R1N4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nudcd3Q8R1N4 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.66■□□□□ 0.9
Nudcd3Q8R1N4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nudcd3Q8R1N4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nudcd3Q8R1N4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nudcd3Q8R1N4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nudcd3Q8R1N4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nudcd3Q8R1N4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nudcd3Q8R1N4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nudcd3Q8R1N4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nudcd3Q8R1N4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nudcd3Q8R1N4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nudcd3Q8R1N4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Nudcd3Q8R1N4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nudcd3Q8R1N4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nudcd3Q8R1N4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Nudcd3Q8R1N4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Nudcd3Q8R1N4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Nudcd3Q8R1N4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Nudcd3Q8R1N4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nudcd3Q8R1N4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nudcd3Q8R1N4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nudcd3Q8R1N4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nudcd3Q8R1N4 Gm11687-201ENSMUST00000118911 886 ntBASIC20.64■□□□□ 0.89
Nudcd3Q8R1N4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.64■□□□□ 0.89
Nudcd3Q8R1N4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nudcd3Q8R1N4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nudcd3Q8R1N4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nudcd3Q8R1N4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nudcd3Q8R1N4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nudcd3Q8R1N4 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.63■□□□□ 0.89
Nudcd3Q8R1N4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nudcd3Q8R1N4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nudcd3Q8R1N4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nudcd3Q8R1N4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nudcd3Q8R1N4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nudcd3Q8R1N4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Nudcd3Q8R1N4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nudcd3Q8R1N4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Nudcd3Q8R1N4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nudcd3Q8R1N4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.62■□□□□ 0.89
Nudcd3Q8R1N4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nudcd3Q8R1N4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nudcd3Q8R1N4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nudcd3Q8R1N4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
Nudcd3Q8R1N4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nudcd3Q8R1N4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nudcd3Q8R1N4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nudcd3Q8R1N4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nudcd3Q8R1N4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nudcd3Q8R1N4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nudcd3Q8R1N4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nudcd3Q8R1N4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nudcd3Q8R1N4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Nudcd3Q8R1N4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nudcd3Q8R1N4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nudcd3Q8R1N4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms